Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00575 ATGCCTAATCTTGAAAAGCTAGTACTCACGGATTGTCCAAGGTTGTCTAAAATATCCTCTACCATTGGATATCTTAATAAAGTTCTTCTAATAAATTTGGAAGACTGTGTTAGTCTTCGTAGCCTCCCAAGAAGCATCTATAAACTGAAGTCTGTAAAAGCTCTCATCCTTTCTGGGTGCTTAATGATTGACAAGTTGGAAGAGGACATAGAACAGATGGAATCTTTAACCACTTTGATTGCAAATAACACCGCAATTACAAGAGTTCCCTTTTCAGTAGTAAGGTCCAAAAGCATTGGATATATTTCTTTGTGCGGCTACGAAGGATTCTCGCGTGATGTGTTCCCATCTATCATTATGTCTTGGATGTCACCAACATCTGGTCTTCCATCCCCGTTTCAAACATCTACTATCGTGTCATCTCTTGTTCCTTTAGATGTATCGCATAGTAGTTCGTATGAACTATCATCAATTTCCAATCAAGTGCACGTTTCAGGATCAAAACATTCCTTCAAGTCTCTTTTGATTCAAATGGGCATGAATTGCCAAGTCACTGATCTTGTGAAAGATAAAATTTTACAGAATATAGATGTCAATGGGTGTGATGGTTCTTTGCTCACCGGTGATAGTTATCCAGATTGGTTAAGTTTCAGTTGTGAAGGTTCTTCTGTAACTTTTGAAGTTCCTCAAGTGGAAGGGCGTAACTTGAAGACAATTATGTGCGTCGTCTATATTTCAACCCCTGATAACATTACATCGGATGGCCTTAAAAATGTGTTGTTAAAAAATTTCACCAAGGCTACCATTCAGCTCTATAAGAGAGAGGCATTAGTCTCCTTTGAAAATGAGGAGGGGCAGAGGGTAGTATCAAGTATGGAACTTGGTAACAAAGTGGAGGTCGCTGTTGTTTTCGAGAACAATTTCATTGTGAAGAATACAACAGTTTATCTTGTATATGAAGAACCAATTGGCAAAAAAAACAAAGCAATGAAGAAAAATTCAATAGGTAACAATAAATTCTTATGGTATTTGCAAATCTTTGTATTTGCAACAATTGTTTTGCAATTTTGGCCGACGTTTCTTGATTTTATCCGTGGTAAATATTTGTAA 1110 0.3694 MPNLEKLVLTDCPRLSKISSTIGYLNKVLLINLEDCVSLRSLPRSIYKLKSVKALILSGCLMIDKLEEDIEQMESLTTLIANNTAITRVPFSVVRSKSIGYISLCGYEGFSRDVFPSIIMSWMSPTSGLPSPFQTSTIVSSLVPLDVSHSSSYELSSISNQVHVSGSKHSFKSLLIQMGMNCQVTDLVKDKILQNIDVNGCDGSLLTGDSYPDWLSFSCEGSSVTFEVPQVEGRNLKTIMCVVYISTPDNITSDGLKNVLLKNFTKATIQLYKREALVSFENEEGQRVVSSMELGNKVEVAVVFENNFIVKNTTVYLVYEEPIGKKNKAMKKNSIGNNKFLWYLQIFVFATIVLQFWPTFLDFIRGKYL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00575 369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 3 198 - -
Trre11g00575 369 SUPERFAMILY RNI-like 1 206 - -
Trre11g00575 369 Coils Coil 63 83 - -
Trre11g00575 369 Gene3D Ribonuclease Inhibitor 1 239 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00575 Trre-Chr11 4540684 4542302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00575 2 93 WRKY Transcription Factor Family AT4G12020 32.609 8.42e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00575 - - cam:101512894 475.322