Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00574 ATGAAGGACAAGGAACCCTCCTCTTTCGTTTTTAAACTCCGTATTCATTGTGTTGGATGCGCCGAGAAGATTGAAAAAGTCGTTCGTAAATTCGACGGTGTGGAGAGTGTTAAAGCCGATATGCTTAGTAATCGAGTGATGGTTAATGGAAAAGTGGACCCTGACAAGCTGCGAGATAGACTGGAGGCTAAACTTAATAGGAAGATTTCAATGGAAAATAAACTTTATGAAGTAATTTCAAAGGAGGAAGACGAGTCCCTTTCAAAGGAGGAGGAAGACAAGTCCCTTTCAGAGGAGGAGGAGGAGGAAGATAAGTTGCTGCATTCTGAGTTGAGCTGGAGAGAGGCACTTCGATGGGCTGCTAACATTGCAGGATTTGTAGTCCTAAATTCCAAGAATGAAAGTCAGGCCGTCAAGGATATTGTTGAAAAAATCACTCATTTGCTTGACAAGACAGAATTTTTCGTTGCTGATAAACCAGTGGGAGTTGATTCTCGAGTGCAAGATGTTATTCAACTGCTCGACATGCAACAATCAAATGATGTACTACTACTTGGGATGTTTGGTATGGGGGGAATCGGTAAAACAACCATTGCAAAAGCCATTTATAATGAAATTGGTCGTAATTTTGAAGAAAATGGAATAAGTGTCCTTGTTGAACGAAGCTTAGTAACTATTAATGATAAAAACAAGCTTGGAATGCATGATTTGTTGCGGGATATGGGAAGAGAAATCATTTGTAATGAATCACGAAAAGAGCCTGAGGAGCGTAGCAGGTTGTGGTGTCCCGAGGATGTAGATGGTGTATTAGCAGGACAAACTGGAACAAAATCTGTTGAGGGATTGGCTTTGGAGTTGCCAAGAGATAGTCCAAAATGTTACAGTACTAAAGCATTTAAGAAGATGAAGAAACTCAGATTGCTTCAACTTTCTGGTGTAAAGAAATTTAGTTTCCATCGAGTTAGAAAACAGCAATGTCAAACTTATGTGGAAAGATACCCCGAGGATGGAGAAGCTGAAAGTTCTTAA 1029 0.4014 MKDKEPSSFVFKLRIHCVGCAEKIEKVVRKFDGVESVKADMLSNRVMVNGKVDPDKLRDRLEAKLNRKISMENKLYEVISKEEDESLSKEEEDKSLSEEEEEEDKLLHSELSWREALRWAANIAGFVVLNSKNESQAVKDIVEKITHLLDKTEFFVADKPVGVDSRVQDVIQLLDMQQSNDVLLLGMFGMGGIGKTTIAKAIYNEIGRNFEENGISVLVERSLVTINDKNKLGMHDLLRDMGREIICNESRKEPEERSRLWCPEDVDGVLAGQTGTKSVEGLALELPRDSPKCYSTKAFKKMKKLRLLQLSGVKKFSFHRVRKQQCQTYVERYPEDGEAESS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00574 342 Pfam Heavy-metal-associated domain 12 66 IPR006121 GO:0046872
Trre11g00574 342 Gene3D - 147 263 IPR027417 -
Trre11g00574 342 SUPERFAMILY "Winged helix" DNA-binding domain 200 270 IPR036390 -
Trre11g00574 342 CDD HMA 15 63 IPR006121 GO:0046872
Trre11g00574 342 ProSiteProfiles Heavy-metal-associated domain profile. 6 69 IPR006121 GO:0046872
Trre11g00574 342 SUPERFAMILY HMA, heavy metal-associated domain 11 63 IPR036163 GO:0046872
Trre11g00574 342 Pfam NB-ARC domain 165 230 IPR002182 GO:0043531
Trre11g00574 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 211 IPR027417 -
Trre11g00574 342 Gene3D - 4 69 - -
Trre11g00574 342 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 213 311 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00574 Trre-Chr11 4536796 4540639 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00574 214 330 WRKY Transcription Factor Family AT4G12020 35.833 2.68e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00574 - - cam:101512894 183.341