Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00565 ATGGGAAGAGAAATCATTCGTGAGAAATCACCAGATGAACTTGAAGGGCGTTGCAGGTTATGGTTTCATGAGGATGTGCTTGATTTATTATCAGAAAAAACTGGAACAAAAGCTATTAAAGGTCTAGCTTTGAAGTTGGCAACAGCTAATGAAAAATGTTATAGTACTAAAGCATTTAAGAAGATGACGAGACTCCGATTGCTTCAACTTGCTGGTGTAAAACTTGATGGAGATTTTGGATATCTTTCAAGAAATCTGAGATGGCTGTCTTGGAATGGATTTTCTTCAACGCATATACCTACAAATTTTTATAGAGAAAATTTAGTTTCCATCGAGTTAGAGAATAGCAATGTGAAACTTGTGTCGAAAGATATCCAGATGATGTCTTGGATGTCGCCTACAACTGGTTTTCCATCCACGTGTCAAACATCTACTATCATGTCATCTCTTGTTCCTTTGGATGTACGACATGGTAGTTCCCATGAAATATCATCAATTTTGAAGTACCTTCCAAGTCTTCGAAGTCTTTGGGTGGAGTGCAGCTCAGAACTTCAACTTTCTAATGATGCAGCAATAATTTTGGATGCCTTGAATGCCACTAATAATAAGGAATTGGAGTCAGCTGCATCTACACCTCAAGTATCAGGAAATTCCTTGAAATCGATTTTCATTCAATTGGGAATGAATTGCCAAGTTGCCAATATTTTGAAACAGAAAATTGTACAGAATATGACTGTCGATGGATGTGGTGGTTATTTGCTCCCCGGTGATAGTTATCCGTATTGGTTAACCTTCAATTGCAATGGTTCTTCTATAATTTTTGAAGTCCCTCAAGTGGAAGGGCGTAACTTAAAGACAATAATGTGCATTGTCGATGGATGTGGTGGTTATTTGCTCCCCGGTGATAGTTATCCGTATTGGTTAACCTTCAATTGCAATGGTTCTTCTATAATTTTTGAAGTCCCTCAAGTGGAAGGGCGTAACTTAAAGACAATAATGTGCATTGTCTATTCTTCAACTGCAGAAGACATAGCATCAGATGGCCTTAGGAACTTGATGGTGAAAAATTACACAAAGACCATCATTCAGCTCTATAAGAGAGAGGCATTAGTCTCATTTGAAGATGGTGAGGGGCAGAGATTAGTATCGAGTATAGAAGCTGGTAATAAAATCGAGGTTCTTCTTGTTTTGGAGAACAATTCCATTGTGAAGAAAACAGCAATTTATCTCATATATGATGAACCAATTGACGAAACCATGGAGCAAAGTCGGTGA 1275 0.3788 MGREIIREKSPDELEGRCRLWFHEDVLDLLSEKTGTKAIKGLALKLATANEKCYSTKAFKKMTRLRLLQLAGVKLDGDFGYLSRNLRWLSWNGFSSTHIPTNFYRENLVSIELENSNVKLVSKDIQMMSWMSPTTGFPSTCQTSTIMSSLVPLDVRHGSSHEISSILKYLPSLRSLWVECSSELQLSNDAAIILDALNATNNKELESAASTPQVSGNSLKSIFIQLGMNCQVANILKQKIVQNMTVDGCGGYLLPGDSYPYWLTFNCNGSSIIFEVPQVEGRNLKTIMCIVDGCGGYLLPGDSYPYWLTFNCNGSSIIFEVPQVEGRNLKTIMCIVYSSTAEDIASDGLRNLMVKNYTKTIIQLYKREALVSFEDGEGQRLVSSIEAGNKIEVLLVLENNSIVKKTAIYLIYDEPIDETMEQSR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00565 424 SUPERFAMILY L domain-like 44 285 - -
Trre11g00565 424 Gene3D Ribonuclease Inhibitor 30 238 IPR032675 -
Trre11g00565 424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 222 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00565 Trre-Chr11 4502488 4504773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00565 2 119 WRKY Transcription Factor Family AT4G12020 34.127 5.61e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00565 - - cam:101494533 355.525