Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00564 ATGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCAATGCTGTCTGAGGTTTCTCCTAGCATTGGAGATCTCAGTAAAATTCTTCTAATAGATTTGGAAGATTGTGTAAGCCTTCGTAGACTTCCAAGAAGCATCTATAAGTTGAAATCGTTGAAAACTCTTATTCTTTCTGGGTGTTTAATGATTGACAAGTTGGATGATGGCTTGGAAGATATGGAATCTTTAACCACTCTGATTGCAAATAACACTGCAATAACAAGAGTTCCCTTTTCAGTAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGCGGCTATGAAGGGTTTGCAAGTGATGTGTTTCCAACTATTATTTGGTCTTGGATGTCACCAACAAATAAGCTCACATCTCCATTTCATGCATTTTCTTCCATGTCATCTCTATTTTCTTTAAATGTACCAAGTAGTAGCTCCCATGAACTATCATCTTTTTCTAACCACCTTCCAAGTCTTCAAAGTCTTTCGGTGGAGTGCAGCTCAGAACTTCAACTTTCTCAGACTGCAGCAATAATTTTGGATGCCTTACATGCCACAAATTATAAGGAGTTGGAACCAGCTGCTACTACATCACAAGTATCAAATATGACTACTTCTACATTAATTCAATGCTGCAGTCAAGTGCACGTTTCCGGATCAAAACAGTCCTTCCAGTCTCTTTTAATTCAAATGGGAATGAATTGCCAAATCACTGATATTCTGAAAGAGAAAATTTTACAGAATATAGATGTCAACGGGTGTGGTGATTGTTTGCTCCCTGATGATAGTTTTCCAGATTGGTTAACTTTCAGTTGTGAAGGTTCTTCTGTAACTTTTGAAGTTCCTCAAGTGGAAGGGCGTAACTTGAAGACAATGATGTGCGTCGTCTATACTTCTACCCCTGATAACATCACATCGGATGGCCTTAAAAACGTGTTGGTAAAAAATTTCACAAAGACTACCATTGAGCTCTATAAGAGAGAGGCATTAGTCTCCTTTGAAGATGAGGAGGGACAGAGAGTAGTATCAAGTATAGAACCTGGTAACAAAGTGGAGGTTGCTGTCGTTTTTGAAAATGGTTTCATTGTGAAGAATACAACAGTTTATCTCGTATACGAGGAACCAATTGGCCAAAAAAAGAACAAAAAGAAGAAAAGTCAGACGGCTGAAAATCAATTCTTACGGTATTTGCAAATCTTTGTATTAGCAATTGTACTCCATTTTTTGCAGAAGCTTCTCGATTTTATTCATGGTAAAGTTCTGTAA 1284 0.3731 MPNLEKLVLKDCPMLSEVSPSIGDLSKILLIDLEDCVSLRRLPRSIYKLKSLKTLILSGCLMIDKLDDGLEDMESLTTLIANNTAITRVPFSVVRSKSIGYISLCGYEGFASDVFPTIIWSWMSPTNKLTSPFHAFSSMSSLFSLNVPSSSSHELSSFSNHLPSLQSLSVECSSELQLSQTAAIILDALHATNYKELEPAATTSQVSNMTTSTLIQCCSQVHVSGSKQSFQSLLIQMGMNCQITDILKEKILQNIDVNGCGDCLLPDDSFPDWLTFSCEGSSVTFEVPQVEGRNLKTMMCVVYTSTPDNITSDGLKNVLVKNFTKTTIELYKREALVSFEDEEGQRVVSSIEPGNKVEVAVVFENGFIVKNTTVYLVYEEPIGQKKNKKKKSQTAENQFLRYLQIFVLAIVLHFLQKLLDFIHGKVL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00564 427 Gene3D Ribonuclease Inhibitor 1 197 IPR032675 -
Trre11g00564 427 SUPERFAMILY L domain-like 1 267 - -
Trre11g00564 427 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 2 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00564 Trre-Chr11 4499615 4501072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00564 2 93 WRKY Transcription Factor Family AT4G12020 38.043 1.01e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00564 - - tpra:123910017 716.842