Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00557 ATGTCTAAAAAGGCTATGACATCAATGAAGGATGAAAATCAAGAATTGCAGAAGCAAATTGGATGTATCAGTGGATTTTTCCAGCTGTTTGATCGTCATAGGTTCCTCACAAGCCATAACAACAACAGCAACAGTCACAATATACCAAATCAAGGGGGAACAAGTAATAACATCAAAGAGCTGAATAATACAACACAAAAGACAAAGGTAAAGAATGTGAAGGTGGCAAGAGAGAATCAACAATCCTCCACAGAATCATCATCTGGAATATCAATGTCTTCGTCGTCTTGTTCATCTAGCATGTCATCCCTCGAGTTTAACAGAACAATACAGATAGAACCGCCATCGGTAAGTCCAATGAAAATCACAGAAAACTCCAAATCAGAACCAGAAATGAAGCAACTTGGCAGCCAAAGACATCAGCCCCTTGATTTCCTTGATATTGTAAAAGATTCAATGCATATAGATTCACAAAGATTATCGGTGAAAACTCTGGCTAAAGAGGAAAAGAAGAATCGAATCTTGAAACACATCGACTCTCCGCGGCCTATGACAGCTTGGGATTCACCAAGACTCTCCTATGATGGGAGAGATATACAAAGCACACTCAAATCTGCAACAAAGCAAAAGGAACTCCCAAGGCTTTCCTTGGACAGCAAGGTAAGGTCCATCAAAAGTTTCAACGAAGGAGCAAAAAATCGGAACCTTTTGAAGGGTCCACAGAGAGTATGTGGAGGCTCTAACACAATGGTCAAGCAGATGGAAGAACCAGACACTTCTAAAAGACCATCAAGTGTTGTGGCAAAGTTGATGGGACTAGAAGCATTCCCTGATTGGAGCGAAACTTGTGATATCTGCAACACTGACAAAGATGAGACCTTTGCAGGATCTAGAATGAGTGATGAATGCATGCAACAGAAAGATTCGGAATTCTCAAGGACAATCAAAGGGACTACTTTGATTCAATCTCGGAGGGATGGTTCGATCACAAATGTGACACCATATTCACTACAGGCTTCCAAGAGTAGTGAAGCTTCAACAAAAGCATCAAACCGGTCCCTCACAGTTTATGGTGAAATTGAGAAAAGGATGGCGAATCTGGAGTTCACAAAATCCGGAAAGGATCTTAGAGCCCTTAAACAGATTCTTGAAGCAATGCACAGATACAAAGAATCATTAGATACTACAAGTGACCAGGCTTCAAATTCTCCATATGACAATAGGAGTAATAGTAGTGTCAGTGAAAGCTCAAATTTACAAAGCCCAAGAACACGGCAGAAGAACCCGACGACATCTGTCACAGTTGAGAGATTGAATTCAACTCAGGGTAGTAAATCTCCAATTGTCATCGTGAAATCAACAAAGGTTGCAAGAAAAACAAATAATTCTTCCACAGAAATGTCAATTAATGTTAAACCCTTGGGTAGCAAGGTTTCACGCAGCGATCCTACCAATGGAATGTTGGTTGGCAAGCTTGGCAGGCAAACAGCAAAAGGTAGTCCAGCAATCAAACATGTCAGAGATCCTATTAGTCCACCCTTTCGTTCAGTGGATAAAAGCAATAAGATGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCCTCGAGTCATCATTGGAGAAAACAACACCAACTCCAGCATTATGGTAGAGACCAAGAGCCCGAGACTACAAAAGAAGTTCGGTTTAGAGAGGCGTTCCCCGCCAAGCAGCCCATCATCAGACATCAGCAGTAACAGAAGACAGCAAAATAGGCAATCAATGGAATTGTCTTCCTCGAGAACACCATCTAGACAAAAAATCTCAACTTTGCAGGAAAGAAATGAAAAGGACTCGAGCAAGGAAAGCTTTATGGCTGAAACAATAGTTACTGCAGAACAACCTAGTCCTGTGTCCGTTCTTGATGCCGCGTTCTATAGAGAAGATCCACCTTCTCCGGTAAAAAGGAAAACAAGCATCTCAAAAGATTTAGATGAAGTTCTGAACACTTATGATACTAGTGAGGAGGACTCGGAAGACACAAAAGTCAACTTCAGCAATGGAACCAGTGATATTGACTTGATAACTCATAATTTAGTTCAAATTCTACAACAATTTGAACACAGTGATGATGAAAGACTCACGAGTTTCAGTGACCACAAAGATCCTGACCACAAATATATATCAGAAATACTACTAGCATCGAGGCTGCTTGCCAGTCCCAGATATAGCCAGGCATTGCATTCATCAGGTTACCCAATTAACCCAATGTTGTTCCTTGCACTAGAGAAAATAAAGACAAACAAGATGCATGGTAACATTGCTAATATGAACAATCATGAGAAAATGCAAAGAAAGCTCATCTTTGATGTCGTTAATGAAATGCTATTTCAAAAGCTAATATCAGAGAGTTCTTACAAGCCATATCAGCAAAAAGGAACAAAACCAGAAGGACAGCATCTTTTGGATACGCTTTGCACAGAAATTGATAAGTTACAACATAAAAATAGGAATATCAGCCTGGCTAATGAGGATGAGTATTTGACAAGTATCTTGTTAGAAGATTTGGTGCAGCGACCGACAAATACAGAATGCTACAATGAGATACCAAATGTTGTGTTGGATATTGAAAGATTGATATTCAAAGATTTGATAACTGAAGTTGTGAGAACTGAGAAGTGA 2661 0.3991 MSKKAMTSMKDENQELQKQIGCISGFFQLFDRHRFLTSHNNNSNSHNIPNQGGTSNNIKELNNTTQKTKVKNVKVARENQQSSTESSSGISMSSSSCSSSMSSLEFNRTIQIEPPSVSPMKITENSKSEPEMKQLGSQRHQPLDFLDIVKDSMHIDSQRLSVKTLAKEEKKNRILKHIDSPRPMTAWDSPRLSYDGRDIQSTLKSATKQKELPRLSLDSKVRSIKSFNEGAKNRNLLKGPQRVCGGSNTMVKQMEEPDTSKRPSSVVAKLMGLEAFPDWSETCDICNTDKDETFAGSRMSDECMQQKDSEFSRTIKGTTLIQSRRDGSITNVTPYSLQASKSSEASTKASNRSLTVYGEIEKRMANLEFTKSGKDLRALKQILEAMHRYKESLDTTSDQASNSPYDNRSNSSVSESSNLQSPRTRQKNPTTSVTVERLNSTQGSKSPIVIVKSTKVARKTNNSSTEMSINVKPLGSKVSRSDPTNGMLVGKLGRQTAKGSPAIKHVRDPISPPFRSVDKSNKMRTSKLMQSSKVPRVIIGENNTNSSIMVETKSPRLQKKFGLERRSPPSSPSSDISSNRRQQNRQSMELSSSRTPSRQKISTLQERNEKDSSKESFMAETIVTAEQPSPVSVLDAAFYREDPPSPVKRKTSISKDLDEVLNTYDTSEEDSEDTKVNFSNGTSDIDLITHNLVQILQQFEHSDDERLTSFSDHKDPDHKYISEILLASRLLASPRYSQALHSSGYPINPMLFLALEKIKTNKMHGNIANMNNHEKMQRKLIFDVVNEMLFQKLISESSYKPYQQKGTKPEGQHLLDTLCTEIDKLQHKNRNISLANEDEYLTSILLEDLVQRPTNTECYNEIPNVVLDIERLIFKDLITEVVRTEK 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00557 886 MobiDBLite consensus disorder prediction 393 446 - -
Trre11g00557 886 MobiDBLite consensus disorder prediction 395 446 - -
Trre11g00557 886 MobiDBLite consensus disorder prediction 495 529 - -
Trre11g00557 886 Pfam Domain of unknown function (DUF4378) 717 880 IPR025486 -
Trre11g00557 886 MobiDBLite consensus disorder prediction 553 615 - -
Trre11g00557 886 MobiDBLite consensus disorder prediction 567 602 - -
Trre11g00557 886 MobiDBLite consensus disorder prediction 117 132 - -
Trre11g00557 886 MobiDBLite consensus disorder prediction 38 100 - -
Trre11g00557 886 PANTHER LONGIFOLIA PROTEIN 1 616 IPR033334 GO:0051513
Trre11g00557 886 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00557 Trre-Chr11 4439414 4444042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00557 1 885 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.207 1.81e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00557 - - cam:101511926 1229.93