Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00501 ATGGAAGGAACAAAGAAGAGAGTGTTTGGTTCATCAATTTCACCAACAATGGTGTTTCTATTTCTGGGTTTTGCTGTTCTTTTCATTTTACCAATGGCATCAGCTACAAAAGTTACAGTTGGTGGTAAAATGGGTTGGACCACAAATTTCAATTACACTACTTGGGCTAAAGGAAAGCATTTCTACAATGGTGATTGGCTTTTTTTTGTGTATGATAGGAATCAACAGAATGTACTAGAAGTGAACAAAACAGATTATGAAACTTGCAACTCAGATCACCCGCTTCACAATTGGACAACCGGAGCTGGAAGAGATGTCGTACCATTGAACGTGACTCGCCATTACTATTTCATAAGCGGCAAAGGATTTTGCTTTGCTTGGGATTCATTCATTTATTTATGGTAA 405 0.3778 MEGTKKRVFGSSISPTMVFLFLGFAVLFILPMASATKVTVGGKMGWTTNFNYTTWAKGKHFYNGDWLFFVYDRNQQNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCFAWDSFIYLW 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00501 134 PANTHER BLUE COPPER PROTEIN 34 124 IPR039391 GO:0009055
Trre11g00501 134 FunFam Lamin-like protein 34 128 - -
Trre11g00501 134 SUPERFAMILY Cupredoxins 35 122 IPR008972 -
Trre11g00501 134 Pfam Plastocyanin-like domain 46 122 IPR003245 GO:0009055
Trre11g00501 134 ProSiteProfiles Phytocyanin domain profile. 36 134 IPR003245 GO:0009055
Trre11g00501 134 Gene3D - 34 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00501 Trre-Chr11 4022365 4024359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00501 20 125 Phytocyanin Superfamily AT5G15350 59.434 4.61e-45 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00501 - - mtr:11412511 248.44