Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00498 ATGTTGATGATGAGTGTAATGGTTTTGGGAATGTTGTCATTGTGGCCAATGGTGGTGATGGGAAAACCAGTGCTTCATAAGGTGGGAGGATCCAAAGGTTGGAATGAAAATGTCAATTACACTATATGGTCTTCTCAACAGCATGTTTATGTTGATGATTGGCTAATTTTTAAGTTTGATAAAAGATACTACAATGTCTTGGAAGTGAACAAGACATGCTATGAGGATTGCATAGATACTACCTTCATAAAAAACGTGACGCGAGGAGGTCGTGACGTGGTTCAATTGACAGAGGCAAAAACATATTACTTTCTCTCTGCCGGAGGTTATTGTTTTCATGGAATGAAAGTTGCCGTAGACGTTCAAGAATATCAAACAGATGCACCATCTCTATCTCCATCGGCTTCGATGAAATCTGGTGTTGGTTCTATTTTGCCATCAATGTACACATCCTTTGGAATTATTATTGCTAATGTGGTTTATGTAAGTTTGGTTTCAATGGGGATATTGTAA 513 0.3821 MLMMSVMVLGMLSLWPMVVMGKPVLHKVGGSKGWNENVNYTIWSSQQHVYVDDWLIFKFDKRYYNVLEVNKTCYEDCIDTTFIKNVTRGGRDVVQLTEAKTYYFLSAGGYCFHGMKVAVDVQEYQTDAPSLSPSASMKSGVGSILPSMYTSFGIIIANVVYVSLVSMGIL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00498 170 Gene3D - 25 133 IPR008972 -
Trre11g00498 170 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
Trre11g00498 170 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Trre11g00498 170 PANTHER BLUE COPPER PROTEIN 25 126 IPR039391 GO:0009055
Trre11g00498 170 FunFam Lamin-like protein 22 124 - -
Trre11g00498 170 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00498 Trre-Chr11 4004435 4006499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00498 17 157 Phytocyanin Superfamily AT2G27035 41.549 7.96e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00498 - - gmx:100788336 214.542