Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00497 ATGGAAAATTCATCAAGAGTGATGTTGATGATGAGTGTAATGGTTTTGGGAATGTTGTCATTGTGGCCAATGGTGGTGATGGGAAAACCAGTGCTTCATAAGGTGGGAGGATCCAAAGGTTGGAATGAAAATGTCAATTACACTATATGGTCTTCTCAACAGCATGTTTATGTTGATGATTGGCTAATTTTTAAGTTTGATAAAAGATACTACAATGTCTTGGAAGTGAACAAGACATGCTATGAGGATTGCATAGATACTACCTTCATAAAAAACGTGACGCGAGGAGGTCGTGACGTGGTTCAATTGACAGAGGCAAAAACATATTACTTTCTCTCTGCCGGAGGTTATTGTTTTCATGGAATGAAAGTTGCCGTAGACGTTCAAGAATATCAAACAGATGCACCATCTCTATCTCCATCGGCTTCGATGAAATCTGGTGTTGGTTCTATTTTGCCATCAATGTACACATCCTTTGGAATTATTATTGCTAATGTGGTTTATGTAAGTTTGGTTTCAATGGGGATATTGTAA 534 0.3801 MENSSRVMLMMSVMVLGMLSLWPMVVMGKPVLHKVGGSKGWNENVNYTIWSSQQHVYVDDWLIFKFDKRYYNVLEVNKTCYEDCIDTTFIKNVTRGGRDVVQLTEAKTYYFLSAGGYCFHGMKVAVDVQEYQTDAPSLSPSASMKSGVGSILPSMYTSFGIIIANVVYVSLVSMGIL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00497 177 FunFam Lamin-like protein 29 131 - -
Trre11g00497 177 PANTHER BLUE COPPER PROTEIN 32 133 IPR039391 GO:0009055
Trre11g00497 177 Pfam Plastocyanin-like domain 41 122 IPR003245 GO:0009055
Trre11g00497 177 SUPERFAMILY Cupredoxins 32 129 IPR008972 -
Trre11g00497 177 Gene3D - 32 140 IPR008972 -
Trre11g00497 177 ProSiteProfiles Phytocyanin domain profile. 31 130 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00497 Trre-Chr11 4004435 4006520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00497 24 164 Phytocyanin Superfamily AT2G27035 41.549 1.09e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00497 - - gmx:100788336 217.238