Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00436 ATGGAAAAGCAGTGGGTGGCCGGAACATACGGTTACATGCCTCCAAAGTACGTTGGTCGTGGACATTTCTCCACGAAATCAGATGTCTTTAGTTATGGTGTGATAGTTCTCAAGATAGTGTCCGGGAAGAAGAACACAAAATTTTCTGACCCAGAATATTACCACAATCTTCTTGGATATGCATGGAGATTATGGTTGGAAGAAAGGGCATTGGAACTATTGGATGAAAGATTAGGGCAACAATGTACACCATCCGAAGTCATTCGATGCATACAAGTGGGATTATTGTGTGTTCAACAAAGACCGGAAGATAGGCCGGACATTTCATCTGTGGTTCTAATGCTGAATAGAGAAAAATTGTTGTCAAGGCCAAAGTTTCATAGTTTTTACATTGAAAACAATGTAAAACCTGAATTAGATTCTTCGTCTTCGAATCAAAACCTATTTTTGGCTAATGAATTATCCATCACAGAGTTAGTTGCAAGATAG 489 0.3906 MEKQWVAGTYGYMPPKYVGRGHFSTKSDVFSYGVIVLKIVSGKKNTKFSDPEYYHNLLGYAWRLWLEERALELLDERLGQQCTPSEVIRCIQVGLLCVQQRPEDRPDISSVVLMLNREKLLSRPKFHSFYIENNVKPELDSSSSNQNLFLANELSITELVAR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00436 162 Gene3D Transferase(Phosphotransferase) domain 1 2 133 - -
Trre11g00436 162 Pfam Protein tyrosine and serine/threonine kinase 11 113 IPR001245 GO:0004672|GO:0006468
Trre11g00436 162 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g00436 162 SUPERFAMILY Protein kinase-like (PK-like) 5 133 IPR011009 -
Trre11g00436 162 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00436 Trre-Chr11 3508292 3510000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00436 5 162 Receptor kinase-like Gene Family AT4G23140 44.785 1.07e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g00436 PK_Tyr_Ser-Thr 6.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00436 - - tpra:123905706 254.218