Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00434 ATGATTTGTTTTTCAGTTTTTGTGTATGATAGGAACCAACAGAATATCCTAGAAGTGAACAAAACAGATTATGAAAGTTGCAACTCAGATCACCCGCTTCACAATTGGACAACCGGTGCCGGAAGAGATGTCGTACCATTGAACGTGACTCGCCATTACTTTTTCATAAGCGGCAAAGGATTTTGCTTTGGTGGAATGAAACTTGCCGTTCATGTTAAAAATCTACCACCACCACCGAAAGCTTCACCTGTAAAATCTTTTGCACCAACCCTTTCTTCTGAAGGACATATCTTTCTCATGCCTATTGTTTTTGCTATTGGTGCAGCTTGA 330 0.403 MICFSVFVYDRNQQNILEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYFFISGKGFCFGGMKLAVHVKNLPPPPKASPVKSFAPTLSSEGHIFLMPIVFAIGAA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00434 109 ProSiteProfiles Phytocyanin domain profile. 1 74 IPR003245 GO:0009055
Trre11g00434 109 PANTHER BLUE COPPER PROTEIN 6 79 IPR039391 GO:0009055
Trre11g00434 109 SUPERFAMILY Cupredoxins 6 72 IPR008972 -
Trre11g00434 109 Pfam Plastocyanin-like domain 6 66 IPR003245 GO:0009055
Trre11g00434 109 Gene3D - 4 73 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00434 Trre-Chr11 3496358 3496687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00434 7 102 Phytocyanin Superfamily AT5G15350 59.794 4.76e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00434 - - mtr:11412511 194.897