Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00336 ATGGATTTAGTTCTAAGCAATCTAAACACAACATCCATTGCACTCCTAATATCTCTAATTCCACTATTATTGTTTCTATTTGGATTCACAAAATTTGCTCATAGCAAAAACAAGGAGGCACCAATAGCCAAAGGAGCATGGCCAATACTTGGTCACCTCCCAATTTTTAGTGGCACACAACCACCCCATAGAGTCTTAGGTACCTTAGCTGATAAATATGGACCAATATTCACCATCAAATTTGGTTCTAAACATGCTTTAATAATCAACAATTGGGAAATGGCCAAGGAATGTTTCACTACAAACGACATGGCCGTTACGTCTCGACCCGCACTCATTGCAATAGAACACTTAGCCTATAGTGGAGCCATGTTTGGCTTTTCAGCCTATGGTCCATATTGGCGATGCCTTCGTAAGATTGCAACTTCAGAGATTCTAACTAATCGCAGAGTCGAACAATATCAACATGTTCGTGTTTCTGAAGTTCAAACATCGATTAAAGAGCTTTTCGATATTTGGTCTAACAAAAAGAACGAGTCATATTCATCAAACTATGTGTTGGTGGATATGAAACAATGGTTTACACACTTAACATTTAATATGGTTCTTAGAATAGTTGTTGGGAAGAGATATTTTGGTGCAAAAACTAATGTTGAGGAAAAAGAAGCTCAAAGAAGTGTGAAAGCTTTGAATAAAATGATGCATCTATTTGGAGTAATAACAATTGGAGATGTTATTCCTTGGTTGAAATGGTTTGACTTTGGTGGTCATGTGAAGGCCATGATTGAAACTTCTAAAGAATTGGATGAAATTTTAGGTGAGTTGTTGAAGGAGCGTCGCCATGAAAGAACATTGAGTGAAAATGTTGATGGTCAAGATCAAGACATCATGGATGTGTTGCTTTCATTGCTTGATGGAACAACTATTGAAGGGTTTGATTGTGATACTATAATCAAAGCCACAATATTGACATTATTTACCGGAGGAAGTGACACGAGTAGTGTTACCCTTACATGGGCATTATGTTTGCTATTGAAAAATCCTCAAACAATGGAAAAAGCAAAAGAAGAACTTGACATTCACGTTGGAGAAGAAAGATGTGTAAGGGAGTCAGATATAGGTAATTTGGTATACCTTCAAGCTATAGTCAAAGAAACATTAAGATTGTATCCACCGGGTCCTCTTGCAGCGCCTCATCCTAGTATTTGGCCAAATCCATTAGATTTCAAACCAGAAAGGTTTCTTAACAGTCATAAATATGTTGATGTTAGGGGTCATCATTTTGAACTACTACCATTTGGAGGTGGGAGAAGAATTTGTCCTGGAATATCTTTTGCACTTCAAATGGTCCATTTAACTCTAGCAAGTTTTTTGCATTCATTTGATATATTAAATTCAACACCTGAACTTGTCAATATGGTTGAAGAGTTTGGATTAACAAACACTAAAGCTACTCCTCTTGAGATTCTTGTTAAACCATGTTTGCCTCTCAATTGTTACGAAATTTTATGA 1512 0.3657 MDLVLSNLNTTSIALLISLIPLLLFLFGFTKFAHSKNKEAPIAKGAWPILGHLPIFSGTQPPHRVLGTLADKYGPIFTIKFGSKHALIINNWEMAKECFTTNDMAVTSRPALIAIEHLAYSGAMFGFSAYGPYWRCLRKIATSEILTNRRVEQYQHVRVSEVQTSIKELFDIWSNKKNESYSSNYVLVDMKQWFTHLTFNMVLRIVVGKRYFGAKTNVEEKEAQRSVKALNKMMHLFGVITIGDVIPWLKWFDFGGHVKAMIETSKELDEILGELLKERRHERTLSENVDGQDQDIMDVLLSLLDGTTIEGFDCDTIIKATILTLFTGGSDTSSVTLTWALCLLLKNPQTMEKAKEELDIHVGEERCVRESDIGNLVYLQAIVKETLRLYPPGPLAAPHPSIWPNPLDFKPERFLNSHKYVDVRGHHFELLPFGGGRRICPGISFALQMVHLTLASFLHSFDILNSTPELVNMVEEFGLTNTKATPLEILVKPCLPLNCYEIL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00336 503 Pfam Cytochrome P450 46 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 Pfam Cytochrome P450 400 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 Gene3D Cytochrome P450 29 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 FunFam Cytochrome P450 82C4 30 402 - -
Trre11g00336 503 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PANTHER CYTOCHROME P450 82C3-RELATED 18 401 - -
Trre11g00336 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Trre11g00336 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 SUPERFAMILY Cytochrome P450 46 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00336 503 CDD CYP82 74 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00336 Trre-Chr11 2657010 2659155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00336 14 493 Cytochrome P450 AT4G31940 44.015 2.63e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00336 - - gmx:100805047 620.542