Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00335 ATGGATTTGGTTCCAAGCAGTTTAATAAACACCACAACAATTGTACTCTTTCCTCTAATTCCCATATGTTTGTTTCTATTTATATTCTCAAAAATTTCTTATAGAAAAAACAAAGAGGCACCAATAGCCGAAGGTGCATGGCCAATACTTGGTCACCTCTCACTTTTTAGGGGCACACAATCACCCCATAGAGTCTTAGGTACCTTAGCTGATAAATATGGACCAATATTCACCATCAAGTTTGGTTCAAAACATGCTTTAGTTATCAACAATTGGGAAATGGCCAAAGAATGTTTCACTACAAACGATATGGTTGTTTCGTCTCGTCCCAAGCTTGTCGCAACCGAACATTTGGCCTATAAAGGAGCCATGTTTGGTATTGCACCATATGGTCCTTATTGGCGCGAAATTCGAAAGATTACAACCTTAGAGGTCTTCTCGAATCGTAGAGTCGAACAACAACAACATGTTCGTGTTTCTGAAGTTCGAGCATCGATTAAAGAGCTCTTTGATGTTTGGTCTATCAAAAAGAATGAGTCATGTTCATCAAATTATGTGTTAGTAAACATGGATCAATGGTTTACACATTTAACATTCAACACGGTTCTTCAAATTGTTGTTGGGAAGAGATACTTTGGTGTAAAAAATATTGAAGAGGAAAAAAAAGCTCAAAGATGTGTGAACGCTTTGAAAGAGTTGATGCATTTATTTGGGATAGTCACGGTGGGAGATGTTATTCCATGTTTGAATTTTTTTGATTTTGGTGGTCATGTGAAGGCTATGAAAAAAACTTCAAAGAAATTGGACAAAATTTTAGATGAGTGGTTGAAGGAGCATCGTCATAAAAGGACTTTAGGTGAAAATGTTGATCATCAAGGTCAAGACATCATGGATGTGTTGATTTCATTACTTGATGGAAGAACCATTGAAGGGTTTGATTCTGATACCATAATCAAAGCCACAATATTGACACTATTCTCCGGCGGAAATGATACAACCGGTGTTACTCTTACGTGGGCACTATGTTTGCTATTGAGAAATCCGCTAGTAATGGAAAAAGCAAAAAAAGAACTTGACATCCAAATTGGTAAAGAAAGATGTGTAAGTGAGTTAGATATCTGTAAATTGATATACCTTCAAGCTATAGTTAAAGAAACACTAAGATTATATCCACCAGCCCCTCTCTCGGGACCTCATGAGTTTTCAGAGAATTGTACTTTAGGTGGTTATCATGTTAAAAAAGGAACTCGATTAATCACAAATCTTTGGAAGATACATACTGATCCTAGTGTTTGGTCAAACCCGCTAGAGTTTAAACCAGAAAGGTTCCTTACCACTCACAAAGATGTTGATGTTAGGGGTAAACATTTTGAGCTATTACCATTTGGAAGTGGTAGAAGAATGTGTCCCGGAATATCATTTGGACTTCAAATGTTGCATTTCTCTCTTGCTAATTTTTTGCATTCCTTTGATATCTTAAATCCAACACCTGAACTTGTTGACATGAATGAAGTCTTTGGATTAACAAACACCAAAGCTACTCCACTTGAAATTCTCATTAAACCACGCTTGTCTTTAAATTGTTATGAAAGCATGTGA 1599 0.3646 MDLVPSSLINTTTIVLFPLIPICLFLFIFSKISYRKNKEAPIAEGAWPILGHLSLFRGTQSPHRVLGTLADKYGPIFTIKFGSKHALVINNWEMAKECFTTNDMVVSSRPKLVATEHLAYKGAMFGIAPYGPYWREIRKITTLEVFSNRRVEQQQHVRVSEVRASIKELFDVWSIKKNESCSSNYVLVNMDQWFTHLTFNTVLQIVVGKRYFGVKNIEEEKKAQRCVNALKELMHLFGIVTVGDVIPCLNFFDFGGHVKAMKKTSKKLDKILDEWLKEHRHKRTLGENVDHQGQDIMDVLISLLDGRTIEGFDSDTIIKATILTLFSGGNDTTGVTLTWALCLLLRNPLVMEKAKKELDIQIGKERCVSELDICKLIYLQAIVKETLRLYPPAPLSGPHEFSENCTLGGYHVKKGTRLITNLWKIHTDPSVWSNPLEFKPERFLTTHKDVDVRGKHFELLPFGSGRRMCPGISFGLQMLHFSLANFLHSFDILNPTPELVDMNEVFGLTNTKATPLEILIKPRLSLNCYESM 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00335 532 FunFam Cytochrome P450 82C4 30 521 - -
Trre11g00335 532 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 CDD CYP82 74 523 - -
Trre11g00335 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Trre11g00335 532 PANTHER CYTOCHROME P450 82C3-RELATED 20 529 - -
Trre11g00335 532 Gene3D Cytochrome P450 29 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 Pfam Cytochrome P450 46 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00335 532 SUPERFAMILY Cytochrome P450 46 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00335 Trre-Chr11 2652404 2654770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00335 9 524 Cytochrome P450 AT4G31940 46.857 1.51e-172 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00335 - - gmx:100805047 744.962