Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00331 ATGGATTTAGTTCTAAACTACCTTAACACCGCAACCATAGCACTCATTGCTCTAATTTCCCTCTTTTTCTTTCTATTTCGTTTCTCCAAAGTTTCTCATACCAAAGAACCTCCAATAATTTCAGGGTCATGGCCTTTACTAGGCCACCTTCCATTAATGAGAAATACACAAACACCTCACAAAACCTTAGCTGCCTTAGTTGATAAATATGGACCAATATTCACAATCAAGCTTGGTGCTACAAATGCTTTGGTACTTAACAATTGTGAATTAGCCAAAGAATGTTTCACAAAGAACGACATCGTCGTTTCATCGCGCCCTAAACCGGTCGCGGTTGAACACATGTCGTACAATCAAGCTTTCATTGGTTGGGCACCGTACGGAACATATTGGCGCCAATTAAGAAAAATTGTTACCTTAGAGATTCTCTCAAGTCGCCGAGTTGAACTACTGAGTCACATTCGTGTTTCAGAAGTTCAAACATCGATAAAAGAGCTTGTTAAAGTTTGGTCTAATCAAGTGTCAGTACAAAGTACTAGTCTGTCTAATCTCGCTAGTACTAAAGACTATGTGTCAGTCGAATTGAAAAAATGGTTTGCACAATTGACATTAAATATGGTGTTAAGAATGGTTGTTGGGAAGAGATGTTTTGGTGACATGGTTGATGAGAAAAATAAGGAAGAAGCAATAAGGTTTTTGGATAATATAAGAGATTTTATGCGTTTAATTGGGACATTTACCGTAGGAGATGCTGTTCCATTTTTAAAGTGGTTGGATTTGGGAGGTCATGAGAAAGAAATGAAAGAATGTGCAAAGAAATTTGATATATTGTTGAGTGAGTGGTTGGAAGAACATCGTGAAAAGAAGGTTTTAGGTAGTGATAAGGTTGTGGGAGAAAGAGACTTCTTGGATGCTATGTTTTTGGTGCTTAATGACAAACCCATTGAGGAATTTAGTGCAGATACCATCATCAAAGCCACAACATTGGAATTGATTATAGGAGGAAGTGACTCAACCGCTGGAACACTTTCATGGGCAATGTGTCTACTATTGAAAAATCCCCATGTATTAGAAAAAGCAAAAGAAGAACTTAACACACAAATTGGAAAAGATAGATGGGTAAATGAATCCGATATAAATAATTTAGTGTATCTTAACGCTATAATTAAAGAGACATTAAGATTGTATCCACCAGCTCCATTTTCATCTCCTCGTAAATTTACTGAAGATTGTACAATAGGTGGATATCATATTAAAAAAGGAACTCGATTGATGCCAAATTTCTGGAAGATTCATAGAGATCCTAGTGTTTGGTCAGATCCGTTAGAATTCAAACCTGAAAGATTTCTTACCACCCACAAAGATGTTGATTTTAAGAGTAAAAATTTCGAATTGTTACCATTTGGAAGTGGGAGAAGAATGTGTGCCGGAATGTCCCTTGGTTTGAATATGCTTCATTATATTCTAGCTAACTTCTTGCATTCTTTTGAATTCTTCAATCCTTCTCCACAATCAATTGACGTTACTGAAGTTCTTGAATTTACTAGCACTAAAGCTACTCCACTTGAGGTTTTGGTTAAACCTTCTTTGTCTCTCAAATGTTATGAAACTATGTGA 1617 0.3636 MDLVLNYLNTATIALIALISLFFFLFRFSKVSHTKEPPIISGSWPLLGHLPLMRNTQTPHKTLAALVDKYGPIFTIKLGATNALVLNNCELAKECFTKNDIVVSSRPKPVAVEHMSYNQAFIGWAPYGTYWRQLRKIVTLEILSSRRVELLSHIRVSEVQTSIKELVKVWSNQVSVQSTSLSNLASTKDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDMVDEKNKEEAIRFLDNIRDFMRLIGTFTVGDAVPFLKWLDLGGHEKEMKECAKKFDILLSEWLEEHREKKVLGSDKVVGERDFLDAMFLVLNDKPIEEFSADTIIKATTLELIIGGSDSTAGTLSWAMCLLLKNPHVLEKAKEELNTQIGKDRWVNESDINNLVYLNAIIKETLRLYPPAPFSSPRKFTEDCTIGGYHIKKGTRLMPNFWKIHRDPSVWSDPLEFKPERFLTTHKDVDFKSKNFELLPFGSGRRMCAGMSLGLNMLHYILANFLHSFEFFNPSPQSIDVTEVLEFTSTKATPLEVLVKPSLSLKCYETM 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00331 538 Pfam Cytochrome P450 43 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 ProSiteProfiles RGS domain profile. 203 239 IPR016137 -
Trre11g00331 538 PANTHER CYTOCHROME P450 82C3-RELATED 16 535 - -
Trre11g00331 538 SUPERFAMILY Cytochrome P450 43 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 CDD CYP82 71 528 - -
Trre11g00331 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Trre11g00331 538 Gene3D Cytochrome P450 25 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 FunFam Cytochrome P450 82C4 27 527 - -
Trre11g00331 538 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00331 538 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00331 Trre-Chr11 2606259 2608679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00331 8 530 Cytochrome P450 AT4G31940 44.821 7.59e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00331 - - gmx:100789386 692.575