Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00330 ATGCCCTTTTTGGCCTTTGAAAAACGGGTTGTTACAGGTTGGGCACCGTACGGAACATATTGGCGCCAAATAAGAAAAATTGTTACCTTAGAGATTCTCTCAAGCCGTCGAGTTGAATTACTAAGTCACGTTCGTGTTTCAGAAGTTCAAACATCGATAAAAGAGCTTGTTAAAGTTTGGTCTAATCAAGTGTCAGTACAAAGTACTAGCGAGTCTAATCTCGCTAGTACTAAAGACTATGTGTCAGTCGAATTGAAGAAATGGTTTGCACAATTGACATTAAATATGGTTCTAAGAATGGTTGTTGGGAAGAGATGTTTTGGTGACATGGTTGATGAGAAAAATAAGGAAGAATCAATAAGGTTTTTGGATAATATAAGAGATTTTATACGTTTAACTGGGACATTTACCGTAGGAGATGCTGTTCCATTTTTAAAGTGGTTAGATTTGGGAGGTCATGAGAAAGAAATGAAAGAATGTGCAAAAAAATTTGATATATTGTTGAGTGAGTGGTTGGAAGAGCATCGTGAAAAGAAGGTTTTAGGTAGTGATAAGGTTGTGGGAGAAAGAGACTTCTTGGATGCTATGTTTTTGGTGCTTAATGACCAACCCATTGAGGGGTTTAGTGCAGATACCATCATCAAAGCCACAACATTGGAATTGATTATAGCAGGAAGTGACTCAACCGCTGGAACACTTTCATGGGCAATGTGTCTACTATTGAAAAATCCCCATGTACTAGAAAAAGCAAAAGAAGAACTTAACACACAAATTGGAAAAGCCAGATGTGTAAACGAATCTGATATAAATAATTTAGTCTATCTTCAAGCTATAATTAAAGAGATATTAAGATTGTATCCACCAGCACCATTTCCCTTTCCTCGTGAATTTTCCGAAGATTGTACAATAGGTGGATATCATATTAAAAAAGGAACTCGATTGATGCCAAATTTGTGGAAGATTCATAGAGATCCTCGTGTTTGGTCAGATCCGTTAGAATTCAAACCTGAAAGATTTCTTACCACCCACAAAGATGTTGACTTTAAGAGTAAAAATTTCGAATTATTACCATTTGGAAGTGGGAGAAGAATATGTGCCGGAATGTCCCTTGGTTTGAATATGCTTCATTATATTCTAGCTAATTTCTTGCATTCTTTTGAATTCTTCAATCCTTCTCCAGAATCAATTGATGTGACTGAAGTTCTTGAATTTACTACCACTAAAGCTACTCCACTTGAGGTTTTGGTTAAACCTTCTTTGTCTCTCGAATGCATGTTATGA 1281 0.363 MPFLAFEKRVVTGWAPYGTYWRQIRKIVTLEILSSRRVELLSHVRVSEVQTSIKELVKVWSNQVSVQSTSESNLASTKDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDMVDEKNKEESIRFLDNIRDFIRLTGTFTVGDAVPFLKWLDLGGHEKEMKECAKKFDILLSEWLEEHREKKVLGSDKVVGERDFLDAMFLVLNDQPIEGFSADTIIKATTLELIIAGSDSTAGTLSWAMCLLLKNPHVLEKAKEELNTQIGKARCVNESDINNLVYLQAIIKEILRLYPPAPFPFPREFSEDCTIGGYHIKKGTRLMPNLWKIHRDPRVWSDPLEFKPERFLTTHKDVDFKSKNFELLPFGSGRRICAGMSLGLNMLHYILANFLHSFEFFNPSPESIDVTEVLEFTTTKATPLEVLVKPSLSLECML 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00330 426 ProSiteProfiles RGS domain profile. 93 129 IPR016137 -
Trre11g00330 426 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 358 367 IPR017972 GO:0005506|GO:0016705
Trre11g00330 426 PRINTS E-class P450 group I signature 213 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS E-class P450 group I signature 317 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS E-class P450 group I signature 276 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS E-class P450 group I signature 355 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS E-class P450 group I signature 365 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS E-class P450 group I signature 233 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 SUPERFAMILY Cytochrome P450 14 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PANTHER CYTOCHROME P450 82C3-RELATED 11 422 - -
Trre11g00330 426 Pfam Cytochrome P450 19 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 FunFam Cytochrome P450 82C4 4 417 - -
Trre11g00330 426 Gene3D Cytochrome P450 2 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS P450 superfamily signature 224 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS P450 superfamily signature 356 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS P450 superfamily signature 277 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00330 426 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00330 Trre-Chr11 2600219 2602169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00330 10 423 Cytochrome P450 AT4G31940 45.823 7.09e-130 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00330 - - gmx:100789386 531.946