Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00320 ATGGATTTAGTTCTAAATTTCCAAAATGTCACGACAATAGGTTTTATTTCTCTCATCTTCTTAGTTTATTTATTCCATATTCTTCCTTCCAAAGATGTTAAAAAGGGTAGAGAACCTCCCATGGCCTCAGGTGCATGGCCTATACTAGGTCACCTCTTAGTATTAGGTGGTTCCAAAACACCTCACAAAACATTAGGCACCATGGCTAACAAATATGGACCCCTATTCACAATAAAACTTGGTACAAAACGTGCTTTGGTACTAAGCAATTGGGAAATGGCCAAAGAGTGTTACACTATAAATGACGCCGCCGTTTCGTCTCGTTCTAAACTTGTTGCAATTGAACATATAGCTTATAATCAAGCCAGCTTTGGTTTTGCCCCCTATGGTTCATATTGGCGCGAAATGCGCAAAATTGTTAGTATATTCCTTTCGAATCGTCGAATGGAACAACTAAGCCATGTTCGAGTTGCTGAAGTTAAAACTTCAATCAAAGAGCTTTTTCATGTTTGGTCTAGTAAGAAAAATGATTCTGGCTACTTGTTGGTGGAGATGAAGCAGTGGTTCACCCAATTGGTATTCAATATAGTTTTCCAAACAATGGCTGGGAAGAGATATTTTGGTGACACAGCAGTGGTAAAGGAGAAAGAAGCTCAAAAAGTTGTAAAGGCTTTGAGGTATTTCATGCATATGTTAGGGGTATGTACAATGGCTGATGCTGTTCCTATTCTAAGATGGATGAAATTAGGAGTGAAAGCAATGAAAGAAACTGCCAAAGAATTGGACGTAGTTTTAGATGATTGGTTGGTGGAACATCATAAGATGAAGGGTTTGGTTGAAAAGGTTGAAAGTGACCAAGATTTTATGGACATGATGATTTCAATGCTTGATGGTGCCACAATCAATGGGTTTGATGCTGATACTATAAACAAAGCCACAACATTGGCATTAATATTGGGAGCAACTGATACAAGCACAGTTACCCTTACATGGGTAATTTCTTTACTATTGAGAAATCCTCTTGTATTAGAAAAAGCTAAAGAAGAACTCAACATTCAAATTGGAGAAGAAAGATTCATAAACGAATCCGATATAAATAATTTGGTATACCTTCAAGCAATAGTGAAAGAGACATTAAGATTGTATCCTCCAGGTCCTCTCTCAGCACCTCGTGAATTCACAGAAGATTGCAATTTAGGCGGTTATCATATCAAAAAAGGGACCCGATTAATCACAAATCTTTGGAAAATTCACACTGATGCTAGTATTTGGCCAGATCCATTGAAGTTCAAGCCAGAAAGATTCCTTACCACTCATAAAGATATTGATGCCAAGGGTCAACATTTTGAATTGTTACCATTTGGAAGTGGTAGAAGGATATGTCCAGGAATATCTTTTGGTCTTCATATGATTCATTTAACTTTGGCTAATTTTTTACATTTCTTTGAAATCTCAAATGGATCTAGTGAACCTGTTGATATGACTGAAAATCTTGGAATGACCAATGAAAAAGCTACACCACTTGAAATTCTGGTTAAACCACATTTCTCTCGTGAATATTATGAAACTTAA 1572 0.3677 MDLVLNFQNVTTIGFISLIFLVYLFHILPSKDVKKGREPPMASGAWPILGHLLVLGGSKTPHKTLGTMANKYGPLFTIKLGTKRALVLSNWEMAKECYTINDAAVSSRSKLVAIEHIAYNQASFGFAPYGSYWREMRKIVSIFLSNRRMEQLSHVRVAEVKTSIKELFHVWSSKKNDSGYLLVEMKQWFTQLVFNIVFQTMAGKRYFGDTAVVKEKEAQKVVKALRYFMHMLGVCTMADAVPILRWMKLGVKAMKETAKELDVVLDDWLVEHHKMKGLVEKVESDQDFMDMMISMLDGATINGFDADTINKATTLALILGATDTSTVTLTWVISLLLRNPLVLEKAKEELNIQIGEERFINESDINNLVYLQAIVKETLRLYPPGPLSAPREFTEDCNLGGYHIKKGTRLITNLWKIHTDASIWPDPLKFKPERFLTTHKDIDAKGQHFELLPFGSGRRICPGISFGLHMIHLTLANFLHFFEISNGSSEPVDMTENLGMTNEKATPLEILVKPHFSREYYET 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00320 523 PANTHER CYTOCHROME P450 82C3-RELATED 19 521 - -
Trre11g00320 523 FunFam Cytochrome P450 82C4 30 513 - -
Trre11g00320 523 Pfam Cytochrome P450 41 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 CDD CYP82 73 514 - -
Trre11g00320 523 Gene3D Cytochrome P450 26 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 SUPERFAMILY Cytochrome P450 45 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00320 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00320 Trre-Chr11 2551089 2554528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00320 40 521 Cytochrome P450 AT4G31940 47.561 2.82e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00320 - - gmx:100779366 682.174