Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00316 ATGGCAACAACAAAAACATCATTGTTGCCATTGTTCTTAATCTTCTTAATTAACCTTAATCTCTCCGAATCAAGATTAACATTAGATTACTACAAACAAACATGTCCACAATTCGATCAAATCATTCAACAAACAGTAACCTCAAAACAGATCCAATCACCGACAACCGCCGCCGCCACACTCCGTCTCTTCCTCCACGACTGTCTCCTCCCTAACGGCTGCGACGCCTCCGTCCTCCTCTCTTCCACTCCTTTCAACAAAGCTGAACGTGACAACGACATCAATCGCTCTCTTCCCGGCGACGCCTTCGACCTCATCGTACGTATCAAAACCGCACTCGAACTTTCTTGTCCAAACACCGTTTCTTGCTCCGACATCCTCGTAACTGCAACACGTGATCTCTTAGTCATGCTTGGTGGTCCCCACTTCAATGTCTATCTCGGCCGCCGTGATGGTAGAACCTCCGTGTCAACCGCGGTGAACAATTTTCTACCCAAACCAACTATGCCAATGTCGCAGATCATCGACATTTTCGCGAAAAGAGGGTTTACTGTTGAAGAAATGGTTGCTCTTTCTGGTGCTCATACAGTTGGATTCTCTCATTGTTCTGAATTCACTGCAGATATATACAACAATTCTTCGAACTCCGGTGGTGGTTCTTCGTATAATCCTCGATTTATCGAAGGATTAAGAAAAGCTTGTGGTGATTATAAGAATAATCCAACTTTATCTGTTTTTAATGATATTATGACACCAAATAAGTTTGATAATGTTTATTTTCAGAATTTGCCTAAAGGTTTAGGGGTTTTGAAATCTGATCATGGTTTGTTTAGTGATAATTTAACTAAACCTTTTGTGGAAAGATTTGCTGCGGATCAAGATAGATTCTTTAAGGTTTTTGCTAGTTCTATGCAGAAGCTTAGTCTTTTGGGTGTTATGACTGGTAGGAAAGGTGAGATCAGAAGAAGGTGTGATCAGATTAATTGA 987 0.4134 MATTKTSLLPLFLIFLINLNLSESRLTLDYYKQTCPQFDQIIQQTVTSKQIQSPTTAAATLRLFLHDCLLPNGCDASVLLSSTPFNKAERDNDINRSLPGDAFDLIVRIKTALELSCPNTVSCSDILVTATRDLLVMLGGPHFNVYLGRRDGRTSVSTAVNNFLPKPTMPMSQIIDIFAKRGFTVEEMVALSGAHTVGFSHCSEFTADIYNNSSNSGGGSSYNPRFIEGLRKACGDYKNNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLFSDNLTKPFVERFAADQDRFFKVFASSMQKLSLLGVMTGRKGEIRRRCDQIN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00316 328 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PANTHER - 11 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Trre11g00316 328 Gene3D - 29 328 - -
Trre11g00316 328 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Trre11g00316 328 Pfam Peroxidase 48 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 Gene3D Peroxidase, domain 2 165 307 - -
Trre11g00316 328 FunFam Peroxidase 165 307 - -
Trre11g00316 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g00316 328 FunFam Peroxidase 29 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00316 Trre-Chr11 2488770 2489756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00316 22 328 Peroxidase AT5G40150 66.450 1.28e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00316 K00430 - gmx:100798144 483.411