Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00271 ATGCACAGAATGTATTGTTACAAAGATTTGCTACCTTTTGTGGTTCTTGTTGCCAATGAATGCATTATAACAGGAGTAAACATTTTGTTCAAAGCAGACACTTTGCAAGGAATGAGTAAATATGTCTTTGTTACTTATGCTTATACTTTTGCAACTATCTTCTTCTTTCCTGTGTATTTTTTCTATAGAAGATCAAGAGTGGTTCCTCAACTCAGTTTCTCCATCTTATTTAAAATTGCTCTTCTTGGAGTCATAGGATATTCAGCTCAAGTCATAGGGTATGCTGGCATCAGTTACAGTTCTCCTGCACTTGCCTCAGCAATTGCAAACCTCCTTCCTGCTTTCACCTTCATTTTAGCTGTCATTTGCAGGATGGAAAAGATAGCTATAAAAAGTAGAACTACACAAGCTAAGGTTTGGGGAAGCATTATATCAATATCAGGTGCATTTATAGTGACTTTCTACAAAGGAAAATCAATTATCATTGGTGGCCTTTCCTCCTCCTTTCATCTTCAACACTCAGATGACATTCTTGCATCAATTGATACAAATTGGGCCATTGGTGCCCTTTTGCTGACAGTATCAAAAATACTATTTACCATATGGTTCATTGTTCAGGCGGAAATCATGAAGGAGATTCAAGATGCGCTAACTTCGGGGTCTTTGAAAAATAACACTGGACATATCACTGATCTCTATTGTCTACACTGCAATATTCGGCAAGTTCCTGTGTAA 735 0.3728 MHRMYCYKDLLPFVVLVANECIITGVNILFKADTLQGMSKYVFVTYAYTFATIFFFPVYFFYRRSRVVPQLSFSILFKIALLGVIGYSAQVIGYAGISYSSPALASAIANLLPAFTFILAVICRMEKIAIKSRTTQAKVWGSIISISGAFIVTFYKGKSIIIGGLSSSFHLQHSDDILASIDTNWAIGALLLTVSKILFTIWFIVQAEIMKEIQDALTSGSLKNNTGHITDLYCLHCNIRQVPV 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00271 244 PANTHER WAT1-RELATED PROTEIN 9 229 IPR030184 GO:0016020|GO:0022857
Trre11g00271 244 Pfam EamA-like transporter family 21 153 IPR000620 GO:0016020
Trre11g00271 244 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00271 Trre-Chr11 2178295 2180116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00271 1 218 Nodulin-like Gene Family AT3G28050 45.872 4.79e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00271 - - gmx:100811686 282.337