Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00270 ATGCCTGGCATCAGTTACAGCTCTCCTACACTTTCTTCTGCAATTGGAAATCTCATTCCTGCTTTCACTTTCATGTTAGCTGTCATTTGCAGGATGGAAAAGATAGCTATAAAAACAAGAAGTACACAAGCTAAGATTTGGGGAAGCATTATATCAATATCAGGTGCATTTATAGTGACTTTCTACAAAGGAAAATCAATTATCAATATTTCTCATAATTCCTCAAATGGCATTCTTACATCAGTTGATATAAATTGGGTCATTGGTGGCCTTTTGCTGACAGTATCCAATATACTACTTACCATATGGTTCATTGCTCAGGTTAAAATCATGAAGGAGATTGCAGATGAACTATCTTTGGTCTTCTTTCACAACATATTTGCAACCATTTTGGCTTTATGTGTAGGTTTATTAGCAGAGACAAATAGTAGTCTTTGGAATATAAGACTAGACATATCACTGATCTCTATTGTCTGCACCGTAAGATAA 489 0.3517 MPGISYSSPTLSSAIGNLIPAFTFMLAVICRMEKIAIKTRSTQAKIWGSIISISGAFIVTFYKGKSIINISHNSSNGILTSVDINWVIGGLLLTVSNILLTIWFIAQVKIMKEIADELSLVFFHNIFATILALCVGLLAETNSSLWNIRLDISLISIVCTVR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00270 162 PANTHER WAT1-RELATED PROTEIN 3 160 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00270 Trre-Chr11 2175464 2176300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00270 3 158 Nodulin-like Gene Family AT5G40240 46.012 1.72e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00270 - - gmx:100811686 220.705