Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00268 ATGACTAGAAGATGGTCATTTTACATGGATTTTTTGCCAGTTGTGGTGATCATAGGAAATGAATTTATTGACATGGGTTTACTCACTTTGTTCAAAGCAGCAACACTACAAGGAATGAATAATCATGTCTTTATAGCTTATGCTTATGCTGTTGGTACTTCTGTTCTTCTCCCTGTCACTCTTTTCACTAGAAGATCAAGAGTGGCTCCTCCAATCAGTTTCTCAATTATATGCAAAAGTGTGCTTCTTGGTGCACTAGGATGTGCATCTCAGATTCTAGGATATATAAGTATTAACTTCAGTTCTCCAACACTTGCTTCAGCAATTGCTAATCTAGTACCTGCTTTCACCTTCATGCTAGCTGTCACTTTCAGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGCAATGCTAAGGTAATAGGAAGCATAGTATCAATAGCAGGTGCTTTTGTGTTGACTTTCTACAAAGGACCATCCATCATCAATTCTTCATCACTTCATCAACCAATTGGATTTCTCAAGTCAGTGGATTCAAGTTGGGCCATTGCTGGCATTCTACTGATAATTGACTATTTTCTGGTTTCACTATGGTACATTTTACAGGTACATATCTTGAAAGAGTTTCCAGATGAACTAACATTAGTCTTGTTATACTCCATAACTGCAACAATCATATCAACAGTAGTAGCTTTGTTATCAGTTCCAAATTCAAGTGCATGGAAAATAGGATTAAATCTCTCATTTATCTCCATTATTTCTTCTGGAATTTTCGGAAAGTTGATAGGTAATATAGTTTCTGCATGGGCAATTCACTTAAAAGGTGCTGTCTATGTAACCTCATTCAAGCCACTGCAAATTGTTATTTCTGTTTACTTGGGTGTTATATTCCTTGGTGATAGTCTTCATGTTGGAAGTATAGTTGGAGCCATAATAATCTCAATTGGTCTTTATGGTGTATTATGGGGCAAAGCAACAGAAGAGTTACAGGAAGATGTTGGTATCTTGGAGTCACCATCTACAGAGAATGCACCTCTTTTGCAAAGTTATAGAACTTATCAAACATTTGAAAAGAAAACAGGAAAATTAGAAATATAA 1098 0.3616 MTRRWSFYMDFLPVVVIIGNEFIDMGLLTLFKAATLQGMNNHVFIAYAYAVGTSVLLPVTLFTRRSRVAPPISFSIICKSVLLGALGCASQILGYISINFSSPTLASAIANLVPAFTFMLAVTFRMEKLAAKSRSSNAKVIGSIVSIAGAFVLTFYKGPSIINSSSLHQPIGFLKSVDSSWAIAGILLIIDYFLVSLWYILQVHILKEFPDELTLVLLYSITATIISTVVALLSVPNSSAWKIGLNLSFISIISSGIFGKLIGNIVSAWAIHLKGAVYVTSFKPLQIVISVYLGVIFLGDSLHVGSIVGAIIISIGLYGVLWGKATEELQEDVGILESPSTENAPLLQSYRTYQTFEKKTGKLEI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00268 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Trre11g00268 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 324 - -
Trre11g00268 365 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Trre11g00268 365 Pfam EamA-like transporter family 186 321 IPR000620 GO:0016020
Trre11g00268 365 PANTHER WAT1-RELATED PROTEIN 12 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00268 Trre-Chr11 2168688 2171376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00268 1 354 Nodulin-like Gene Family AT3G28050 47.170 4.63e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00268 - - tpra:123906528 583.563