Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00267 ATGACTAGAAGATGGTCATTTTACATGGATTTTTTGCCAGTTGTGGTGATCATAGGAATTGAATTTATTGACATGGGTTTATTGACTTTGTTCAAAGCAGCAACACTACAAGGAATGAATAATCATGTCTTTATTGCTTATGCTTATGCTGTTGGTACTTCTGTTCTTCTCCCTGTCACTCTTTTCACTAGAAGAGCAAGAGTGGTTCCTCCAATCAGTTTCTCAATTATATGCCAAAGTGTGCTTCTTGGGGCAATAGGATGTACATCTCAAATTCTGGGATATATAAGTATTAATTTCAGTTCTCCAACACTTGCTTCAGCAATTGCAAATCTAGTACCTGCTTTCACCTTCATGCTAGCTGTCACTTTCAGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGTAATGCTAAGGTAATAGGAAGCATAGTATCAATAGCTGGTGCTTTTGTGTTAACATTCTACAAAGGACCATCCATCATCAATTCTTCATTATCACTTCATCAACCAATTGGATTTCTAAAGTCAGTGGATTCAAGTTGGGCCATTGCTGGCATTCTTCTAACAGTTGACTATTTTTTGGTTTCACTATGGTACATTTTACAGGTACATATCTTAAAAGAATTCCCAGATGAACTAACATTAGTTTTGTTATACTCCATAACTGCCACCATCATATCAACAATTGTAGCTTTGTTATCAGTTCCAAATTCAAGTGCATGGAAAATAGGATTAAATCTCTCATTTATCTCCATTATTTCTTCCGGAATTTTCGGAAAGTTGATAGGTAATATAGTTTCTGCATGGGCAATTCACTTAAAAGGTGCTGTCTATGTAACCTCATTCAAGCCACTGCAAATTGTTATTTCTGTTTACTTGGGTGTTATATTCCTTGGTGATAGTCTTCATGTTGGAAGTATAGTTGGAGCCATAATAATCTCAATTGGTCTTTATGGTGTATTATGGGGCAAAGCAACAGAAGAGTTACAGGAAGATGTTGGTATCTTGGAGTCACCATCTACAGAGAATGCACCTCTTTTGCAAAGTTATAGAACTTATCAAACTTTTGAAAACAAAACAGGAAAATTAGAAATATAA 1101 0.356 MTRRWSFYMDFLPVVVIIGIEFIDMGLLTLFKAATLQGMNNHVFIAYAYAVGTSVLLPVTLFTRRARVVPPISFSIICQSVLLGAIGCTSQILGYISINFSSPTLASAIANLVPAFTFMLAVTFRMEKLAAKSRSSNAKVIGSIVSIAGAFVLTFYKGPSIINSSLSLHQPIGFLKSVDSSWAIAGILLTVDYFLVSLWYILQVHILKEFPDELTLVLLYSITATIISTIVALLSVPNSSAWKIGLNLSFISIISSGIFGKLIGNIVSAWAIHLKGAVYVTSFKPLQIVISVYLGVIFLGDSLHVGSIVGAIIISIGLYGVLWGKATEELQEDVGILESPSTENAPLLQSYRTYQTFENKTGKLEI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00267 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Trre11g00267 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 325 - -
Trre11g00267 366 Pfam EamA-like transporter family 190 322 IPR000620 GO:0016020
Trre11g00267 366 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00267 Trre-Chr11 2164488 2167265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00267 1 355 Nodulin-like Gene Family AT3G28050 47.170 3.30e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00267 - - tpra:123906528 570.852