Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00266 ATGACAAGAACATGGTCCTTTTACATGGATTTTCTACCAGTTTTAGTGATTATAGGAAATGAATGTATTGACATGGGTTTACTGACTTTGTTCAAAGCAGCTACACTACAAGGAATGAATAATCATGTCTTTATTGCTTATGCTTATGCTGTTGGCACTTTCGTTCTTTTTCCTCTCACTTTTTTCAGCAGAAGATCAAGAGTGGTTCCACCACTTAGTTTCTCCATCATATGCAAAATTGTGCTTCTTGGTTCAATAGGATCTTCATCTCAGATTTTGGGGTACATTGGTATTAGTTATAGTTCTTCAACACTTGCTTCAGCAATTGGTAACCTTGTACCAGCTTTCACTTTCATGCTAGCTGTCACTTTCAGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGTAATGCTAAGGTAATAGGAAGCATAGTATCAATAGCTGGTGCTTTTGTGTTAACATTCTACAAAGGACCATCCATCATCAATTCTTCATTATCACTTCATCAACCAATTGGATTTCTAAAGTCAGTGGATTCAAGTTGGGCCATTGCTGGCATTCTTCTAACAATTGACTATTTTCTGGTTTCCCTAACCTTCATTTTGCAGGTACATATTTTGAAAGAGTTCTCAGATGAACTAACTTTGGTCTTGTTATACTCCATAACAGCCACAATCATATCAACAATTATAGCTTTGTTATCAGTTCGAAATTCAAGTGTTTGGAAAATAGGACTAAATCTATCATTGATCTCCATTGTTTCTTCTGGCATTTTTGGAAAGTTAATAGGCAATACAATTACTGTTTGGTCAGTGCACTTAAAGGGAGCTGTTTATGTAACCTCATTCAGACCACTCCAAATTGTTATTTCTGTTGCCATGAGTGTTATGTTCCTTGGTGATACTCTTCATCTCGGAAGTATAATTGGTGCAACAATCATCTCAATTGGTCTTTATGGTGTATTATGGGGCAAAGCAAAAGAAGAGTTAGAGGAAGATGTTGGTAGCTTAGAGTCACCATATGCACCTCTTTTGAAAAGCTATAGAACTGATCAAACTTTTGAAAATAAAATAGATGGAAATATTTAA 1089 0.3572 MTRTWSFYMDFLPVLVIIGNECIDMGLLTLFKAATLQGMNNHVFIAYAYAVGTFVLFPLTFFSRRSRVVPPLSFSIICKIVLLGSIGSSSQILGYIGISYSSSTLASAIGNLVPAFTFMLAVTFRMEKLAAKSRSSNAKVIGSIVSIAGAFVLTFYKGPSIINSSLSLHQPIGFLKSVDSSWAIAGILLTIDYFLVSLTFILQVHILKEFSDELTLVLLYSITATIISTIIALLSVRNSSVWKIGLNLSLISIVSSGIFGKLIGNTITVWSVHLKGAVYVTSFRPLQIVISVAMSVMFLGDTLHLGSIIGATIISIGLYGVLWGKAKEELEEDVGSLESPYAPLLKSYRTDQTFENKIDGNI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00266 362 Pfam EamA-like transporter family 188 322 IPR000620 GO:0016020
Trre11g00266 362 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Trre11g00266 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Trre11g00266 362 PANTHER WAT1-RELATED PROTEIN 12 333 IPR030184 GO:0016020|GO:0022857
Trre11g00266 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00266 Trre-Chr11 2160375 2162918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00266 1 352 Nodulin-like Gene Family AT3G28050 47.170 1.48e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00266 - - tpra:123906528 528.865