Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00265 ATGAGAAGAATATGGTCCTTTTACATGGATTTTCTACCAGTTGTAGTGATTATAGGCTTTGAATTTATTGACATGGGTTTACTCACTTTGTTCAAAGCAGCAACACTTCAAGGAATGAATAATCATGTCTTTATTGCTTATGCTTATGTTGTTGGTACTTCTGTTCTTCTCCCTGTCACTCTTTTCACTAGAAGATCTAGAGTGGTTCCTCCACTTAATTTCTCCATAATATGGAAAAGTGTACTTCTTGGAGCAATAGGATGTGCATCTCAGATTTTGGGGTATATAGGTATTAATTACAGTTCTCCAACACTTGCTTCAGCAATTGCTAATCTGGTACCTGCTTTCACTTTCATACTAGCTGTCACTTTCAGGATGGAAAAATTAGTTGCAAAGAGTAGAAGTAGTAATGCTAAGGTATTAGGAAGCATAGTATCAATAGCAGGTGCTTTTGTGTTGACTTTTTACAAAGGACCATCCATCATGAATTCTTCATCACTTCATCAACCAATTGAGTTTCTCAAATCAGTGAATTCAAGTTGGGCTATTGCTGGCATTATACTAACAGCTGACTACTTTCTGCTTTCACTGTGGTATATTTTACAGGTACATATCTTGAAAGAGTTTCCAGATGAACTAACATTAGTCTTGTTATACTCCATAACTGCAACCATCATATCTATAGTTGTAGCTTTGTTATCAGTTCCAGATGCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTCATCTCCATTGTTTCTTCTGGAATTTTTGGAAAGTTGATAGGCAATATAATTTATGCATGGTCAGTTCACTTAAAAGGAGCTGTCTATGTAACCTCATTCATGCCATTCCAAATTGTTATTTCTGTTGGCTTAGGAGTTATATTCCTTGGTGATACTCTTCATATTGGAAGTATAATTGGAGCCATAATAGTCTCAATTGGGCTTTATGGTGTATTATGGGGCAAAGCAACAGAAGAGATAGAGGAAGATGTTGGTACCTTAGAGTCACCATCTACAGAGAATGCACCTCTTTTGCAAAGTTATAGAACTGATCAAACTTTTGAAAACAAAACAAATGTAAATGTTTAA 1095 0.3571 MRRIWSFYMDFLPVVVIIGFEFIDMGLLTLFKAATLQGMNNHVFIAYAYVVGTSVLLPVTLFTRRSRVVPPLNFSIIWKSVLLGAIGCASQILGYIGINYSSPTLASAIANLVPAFTFILAVTFRMEKLVAKSRSSNAKVLGSIVSIAGAFVLTFYKGPSIMNSSSLHQPIEFLKSVNSSWAIAGIILTADYFLLSLWYILQVHILKEFPDELTLVLLYSITATIISIVVALLSVPDASAWKIGLNLSLISIVSSGIFGKLIGNIIYAWSVHLKGAVYVTSFMPFQIVISVGLGVIFLGDTLHIGSIIGAIIVSIGLYGVLWGKATEEIEEDVGTLESPSTENAPLLQSYRTDQTFENKTNVNV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00265 364 Pfam EamA-like transporter family 193 321 IPR000620 GO:0016020
Trre11g00265 364 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Trre11g00265 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 324 - -
Trre11g00265 364 PANTHER WAT1-RELATED PROTEIN 12 337 IPR030184 GO:0016020|GO:0022857
Trre11g00265 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00265 Trre-Chr11 2156856 2159650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00265 7 354 Nodulin-like Gene Family AT3G28050 48.199 4.66e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00265 - - tpra:123906528 592.808