Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00261 ATGGATCTTGAGTCTGTGATTCACAAGAACCCAATTAAGGAGGAATCATGGAAGCATGTGTTGGTTTTAGCTTATCAAAGTTTAGGAGTTGTGTATGGAGATTTAAGCACTTCTCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGATATTAAACATTCAGATACAAATGAAGAAATCTTTGGTGTATTGTCTTTTGTGTTTTGGACATTAACATTGATTCCTCTTCTTAAATATGTGTTCATTGTGTTGAGAGCTGATGATAATGGTGAAGGAGGAACTTTTGCTTTGTACTCTTTGTTATGTAGACATGCTCGTGTGAGTTTGATGCCTAATACTCAGCTTGCAGATGAGGATTTAACACAGTACACAATGGATGAAACTATTGAAATTAATAAGAAAAATGTTGGGTCTAGTTTGAAATCTTTGTTGGAAAAACATAGAGTGCTTCAAAGAGTACTTCTTGTTCTTGCTTTGATTGGAACATGCATGGTTATTGGTGATGGTGTGCTCACACCAGCAATTTCTGTGTTTTCTGCTATTTCAGGTTTAGAGCTTTCCATGTCTAAAGAGCAGCACAAATATGTGGAGGTTCCAGTTGCTTGTATAATACTGATATTTTTATTCGCCCTGCAACATTATGGTACACACCGCGTTGGATGTCTTTTTGCACCAGTTGTGTTGACCTGGCTAATATGCATCAGTGCTATCGGTCTTTATAATATAATCCACTGGAATCCACATGTTTACGAAGCTCTCTCCCCATACTACATGTTCAAATTTCTGAAAAAGACTCAATGGGGAGGTTGGATGTCGTTGGGAGGGATTCTCTTATGTATAACAGGCTCAGAAGCTATGTATGCTGATTTAGGACACTTTAATCAATTGTCTATTCAGATTGCTTTCAGTTTCTTGGTATACCCTTCTTTGATCTTAGCATATATGGGACAAGCTGCATATCTTTCCAAGCATCATTCCCTTGAAAGTGATTATAGAATCGGGTTTTATGTGTCTGTACCAGTAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTATCATCACCGGAACATTCTCAATAATCAAACAGTGTTCTTCTTTAGGGTGCTTCCCCAAAGTCAAAATCGTTCACACATCATCGAAAATACATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTTCTTTGCCTGGCTGTTACAATCGGATTTCGAGATACCAAACGAATGGGAAATGCAGCAGGTTTGGCTGTCATAACTGTCATGCTGGTAACCACGTGCCTGATGTCTCTAGTTATAGTCTTATGTTGGCACAAAAGTGTTTGGCTAGCTATTTGCTTTATATTGTTCTTTGGCTCCATTGAAGCACTCTACTTCTCTGCATCCCTCATCAAGTTCCTTGAAGGCGCTTGGGTCCCTGTCGCCCTCTCACTCATCTTTCTTATTATCATGTATGTGTGGCACTATGGCACAATTAAGAAGTATGAGTTTGATGTTCAAAATAAGGTCCCTATCAATTGGCTCCTTGGTTTAGGCCCAACTCTAGGAATTGTAAGGGTTAAAGGTATCGGCCTAATACATACTGAGCTTGTGTCTGGAATCCCGGCTATTTTCTCTCATTTTGTTACCAATCTTCCTGCCTTTCATCAAGTTGTAATCTTCCTCTGCGTCAAATCTGTCCCGGTACCGCATGTTGCACCTCGAGAAAGATTCTTAGTTGGTAGAATCGGTCCAAAAGAATATAGGCTTTATAGGTGCATAGCACGGTATGGCTACCGTGACTTTCACAAAGATGATATGGAGTTTGAGAAAGATCTTATATGCAGTATAGCCGAATTTATCCGATCTGATACTTCTGAATACGGATTAGGGTTAGGAAATTTCGAAGACGATACTAAGATGACAGTTGTTGGAACTTCATCGTCAAATGTAGAAGGCGTGAGGATTTCAGAAGACGAACATGATAATAATAATTCTCAAATAGAAGGAACTTCGGAGTTGAAGGAAGTTAAGTCACCGGAAAAAGTGAAGAAGAGAGTGAGGTTTGTTGTACCAGATTGTCCGCGGATGGATATGGAAACAAGGGAGGAGTTGCTTGAACTAATGGAAGCAAAGGAAGCAGGAATGGCATTTATAATGAGTCATTCATATGTGAGAGCAAAAAGAGGATCAAGTTGGATGAAGAGAGTTGCTATTAATTATGGCTATGATTTCTTAAGAAGAAACTCTAGAGGACCAACTTATGCTTTAAGTTTACCTCATGCATCTACCTTAGAGGTAGGTATGATCTATCATGTATGA 2334 0.392 MDLESVIHKNPIKEESWKHVLVLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSDTNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLMPNTQLADEDLTQYTMDETIEINKKNVGSSLKSLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAISGLELSMSKEQHKYVEVPVACIILIFLFALQHYGTHRVGCLFAPVVLTWLICISAIGLYNIIHWNPHVYEALSPYYMFKFLKKTQWGGWMSLGGILLCITGSEAMYADLGHFNQLSIQIAFSFLVYPSLILAYMGQAAYLSKHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAIITGTFSIIKQCSSLGCFPKVKIVHTSSKIHGQIYIPEINWSLMLLCLAVTIGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSVWLAICFILFFGSIEALYFSASLIKFLEGAWVPVALSLIFLIIMYVWHYGTIKKYEFDVQNKVPINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVAPRERFLVGRIGPKEYRLYRCIARYGYRDFHKDDMEFEKDLICSIAEFIRSDTSEYGLGLGNFEDDTKMTVVGTSSSNVEGVRISEDEHDNNNSQIEGTSELKEVKSPEKVKKRVRFVVPDCPRMDMETREELLELMEAKEAGMAFIMSHSYVRAKRGSSWMKRVAINYGYDFLRRNSRGPTYALSLPHASTLEVGMIYHV 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00261 777 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre11g00261 777 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre11g00261 777 NCBIfam potassium uptake protein 23 777 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00261 Trre-Chr11 2097669 2103325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00261 1 777 Inorganic Solute Cotransporters AT5G14880 76.982 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00261 K03549 - gmx:100793387 1382.08