Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00254 ATGATCAAATTTTTAACAAGCAAATTCATGACAATATCAATAATTATTCTTCTTCAACAAAACTTAGTATGTTCAAAATGTAGCTGTGAAAATCAAGTAGAAGATTCTTATCATAAAGTATCTGAGGCATTGAAATACAAATTAATTGCTATGGCAACAGTTTTAGTTTCTAGTCTAATTGGTGTATGCATTCCAATTTTTGCAAAAAACTGTACATATTTAAATCCGGAAAACGAATTTTATTTCTTGATTAAAGCATTTGCTGCTGGGGTGATCCTTGCGACCGGTTTCATACACATACTTCCTGATGCATTTGAGGCTTTAACGAGTCCTTGTATAGGCGAAAAACCGTGGAAAATGTTCCCTTTCTCGGGTTTTGTAACAATGGTATCAGCTATTGGGACATTGATTATGGAAGCTTTGATCATGGGGTACCAAAAAAGGTCTGAAATGGAAAAAGCTCAGCCGTTGGATGAGGATGACGAGACTCATGAAGCTAATGGTAGTAGTCATGTTCATAGCTTATCACTTGCATCGGATAAATTAGATTCAACAAATCGCCTCCGGTATATCATAGTTTCTCAGATTTTGGAGCTAGGTATTCTGATGCATTCAATCATTTTAGGGATATCTCTTGGGGTGTCAAGAAGTCCTAAAACAATCAAACCTTTAGTAGCAGTATTATCTTTTCATCAATGCTTTGAAGGAATAGGACTTGGTGGCTGCATTTCTCAGGCACAATTCAAAAACTATAAGGTTGCAATTATGATAATATTCTTTTGCCTCATATTTCCAATTGGAATTTGCATTGGAATGGGAATATCAAAATTCTACAATGAAAGTAGCCCAAAGTCACTAATAGTTGAAGGGTTTCTACTATCAGCATCTGCAGGGGTTCTCATTAACATGGCACTTGTTGATCTTGTTGCCACTGATTTCATGAACTCTAAAATGCTAAGGAATTTTAGGCTACAAATTGGAGCAAGTTTAGCACTTTTTGTAGGGATGCTTTGTATGTCAATTTTGGCATTGGGGGAAGAAGATTCTTAA 1050 0.3562 MIKFLTSKFMTISIIILLQQNLVCSKCSCENQVEDSYHKVSEALKYKLIAMATVLVSSLIGVCIPIFAKNCTYLNPENEFYFLIKAFAAGVILATGFIHILPDAFEALTSPCIGEKPWKMFPFSGFVTMVSAIGTLIMEALIMGYQKRSEMEKAQPLDEDDETHEANGSSHVHSLSLASDKLDSTNRLRYIIVSQILELGILMHSIILGISLGVSRSPKTIKPLVAVLSFHQCFEGIGLGGCISQAQFKNYKVAIMIIFFCLIFPIGICIGMGISKFYNESSPKSLIVEGFLLSASAGVLINMALVDLVATDFMNSKMLRNFRLQIGASLALFVGMLCMSILALGEEDS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00254 349 MobiDBLite consensus disorder prediction 153 172 - -
Trre11g00254 349 PANTHER ZINC/IRON TRANSPORTER 43 340 - -
Trre11g00254 349 Pfam ZIP Zinc transporter 45 343 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre11g00254 349 NCBIfam ZIP zinc/iron transport family 29 344 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre11g00254 349 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00254 Trre-Chr11 2044279 2046154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00254 4 344 Inorganic Solute Cotransporters AT3G12750 44.126 9.59e-98 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00254 K14709 - jre:108984890 421.779