Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00235 ATGAGCGAAATTCTAAAGTTTGATACTAATGTACCTACACCACACCCTAAGGAAGATAAAGTTCTCATCAAGGTTGTGGCTGCTGCCCTTAATCCTGTTGATATTAAGAGGGCTGGAGGTTATTTCAAGGACATTGACTCTCCTTTGCCAACTGTACCAGGATATGATGTGGTTGGTGTGGTGGTTAGTGTGGGAGACCATGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCATTGAGATTACTTTAGACCATCCAAAAACTGTTGGTTCTTTGTCAGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCTAATTTGAGCTTTGTTGAAGCTGCTAGCCTCCCTTTAGCAATAATAACCGCTTATCAAGCACTTGAAAGAGTTGAATTTTCTTCTGGTCAATCTATACTTGTTCTTGGAGGTGCCGGCGGAGTTGGATCTCTTGTTATTCAGCTAGCCAAGCATGTGTTTGAGGCATCAAGAATTGCAGCTACTGCCGGTACTACAAAACTTGAATTTTTGAAGAAGTTGGGAGCAGATTTGGCAATTGATTATACCAAGGAGAATTATGAAGAACTTACAGAAAAATTCGATGTAGTGTATGATGCAGTAGGTGATAGTGAGAGGGCAGTGAAGGCTATTAAAGAAGGGGGAAAAGTTGTGACCATACTGCCACCCGGAACACCGCCGGCTATCCCTTTCGTAGTGACTTCAGATGGAGCTGTGTTAGAGAAATTACAACCATACTTGGAGAGTGGAAAAGTGAAGCCAATATTGGACCCTAAGAGTCCTTTTCCATTTTCTCAAACTGTGGAAGCATATTCATATCTTAATACTAATAGAGCTGTTGGGAAAATAGTTATACATCCCATTCCATGA 900 0.4056 MSEILKFDTNVPTPHPKEDKVLIKVVAAALNPVDIKRAGGYFKDIDSPLPTVPGYDVVGVVVSVGDHVKKFKVGDEVYGDIIEITLDHPKTVGSLSEYTVAEEKVLAHKPSNLSFVEAASLPLAIITAYQALERVEFSSGQSILVLGGAGGVGSLVIQLAKHVFEASRIAATAGTTKLEFLKKLGADLAIDYTKENYEELTEKFDVVYDAVGDSERAVKAIKEGGKVVTILPPGTPPAIPFVVTSDGAVLEKLQPYLESGKVKPILDPKSPFPFSQTVEAYSYLNTNRAVGKIVIHPIP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00235 299 SUPERFAMILY GroES-like 9 147 IPR011032 -
Trre11g00235 299 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 299 IPR044626 GO:0016628
Trre11g00235 299 Gene3D - 132 246 - -
Trre11g00235 299 CDD MDR_like_2 8 295 - -
Trre11g00235 299 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 140 161 IPR002364 GO:0008270|GO:0016491
Trre11g00235 299 SMART PKS_ER_names_mod 3 295 IPR020843 GO:0016491
Trre11g00235 299 Pfam Zinc-binding dehydrogenase 184 295 - -
Trre11g00235 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 239 IPR036291 -
Trre11g00235 299 Pfam Alcohol dehydrogenase GroES-like domain 19 80 IPR013154 -
Trre11g00235 299 Gene3D - 3 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00235 Trre-Chr11 1870990 1873371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00235 18 240 Monolignol Biosynthesis Gene Families AT4G37980 24.901 3.18e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00235 K18980 - gmx:100791274 447.973