Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00234 ATGAGGGCTGGAGGTTATTTCAAGGACATTGACTCTCCTTTGCCAACTGTACCAGGATATGATGTGGTTGGTGTGGTGGTTAGTGTGGGAGACCATGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCATTGAGATTACTTTAGACCATCCAAAAACTGTTGGTTCTTTGTCAGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCTAATTTGAGCTTTGTTGAAGCTGCTAGCCTCCCTTTAGCAATAATAACCGCTTATCAAGCACTTGAAAGAGTTGAATTTTCTTCTGGTCAATCTATACTTGTTCTTGGAGGTGCCGGCGGAGTTGGATCTCTTGTTATTCAGCTAGCCAAGCATGTGTTTGAGGCATCAAGAATTGCAGCTACTGCCGGTACTACAAAACTTGAATTTTTGAAGAAGTTGGGAGCAGATTTGGCAATTGATTATACCAAGGAGAATTATGAAGAACTTACAGAAAAATTCGATGTAGTGTATGATGCAGTAGGTGATAGTGAGAGGGCAGTGAAGGCTATTAAAGAAGGGGGAAAAGTTGTGACCATACTGCCACCCGGAACACCGCCGGCTATCCCTTTCGTAGTGACTTCAGATGGAGCTGTGTTAGAGAAATTACAACCATACTTGGAGAGTGGAAAAGTGAAGCCAATATTGGACCCTAAGAGTCCTTTTCCATTTTCTCAAACTGTGGAAGCATATTCATATCTTAATACTAATAGAGCTGTTGGGAAAATAGTTATACATCCCATTCCATGA 795 0.4075 MRAGGYFKDIDSPLPTVPGYDVVGVVVSVGDHVKKFKVGDEVYGDIIEITLDHPKTVGSLSEYTVAEEKVLAHKPSNLSFVEAASLPLAIITAYQALERVEFSSGQSILVLGGAGGVGSLVIQLAKHVFEASRIAATAGTTKLEFLKKLGADLAIDYTKENYEELTEKFDVVYDAVGDSERAVKAIKEGGKVVTILPPGTPPAIPFVVTSDGAVLEKLQPYLESGKVKPILDPKSPFPFSQTVEAYSYLNTNRAVGKIVIHPIP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00234 264 CDD MDR_like_2 34 260 - -
Trre11g00234 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 204 IPR036291 -
Trre11g00234 264 SUPERFAMILY GroES-like 3 112 IPR011032 -
Trre11g00234 264 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 264 IPR044626 GO:0016628
Trre11g00234 264 Gene3D - 3 260 - -
Trre11g00234 264 Pfam Zinc-binding dehydrogenase 149 260 - -
Trre11g00234 264 Gene3D - 97 211 - -
Trre11g00234 264 Pfam Alcohol dehydrogenase GroES-like domain 8 45 IPR013154 -
Trre11g00234 264 SMART PKS_ER_names_mod 4 260 IPR020843 GO:0016491
Trre11g00234 264 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 105 126 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00234 Trre-Chr11 1870990 1873371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00234 15 205 Monolignol Biosynthesis Gene Families AT4G37980 25.339 4.27e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00234 K18980 - gmx:100791274 398.282