Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00230 ATGGCAAACACACTTAATATTCCATCTAATACAAAAGTTTGGGTTTATTCTCAATATGGTAACATAGAAGAAAATCTAAAGTTTGATACTAATGTACCTACACCACACCCTAAGGAAGATCAAGTTCTCATCAAGGTTGTGGCTGCAGCCCTTAATCCTGTAGATACTAAGAGGGCTCTTGGTTATTTTAAGGACATTGACTCTCCTTTGCCAACTGTGCCAGGATATGATGTTGCTGGTGTGGTGGTTAGTGTGGGAGATCAAGTGAAAAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATTAATGAGAAAGCTATAGACCATCCAAAAACTGTTGGTTCTTTGTCAGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCTAATTTGAGCTTTGTTGAAGCTGCTAGCCTCCCTTTAGCAATAATAACTGCTTATCAAGGACTTGAAAGAGTTGAATTTTCTTCTGGTCAATCTATACTTGTTCTTGGTGGTGCCGGTGGAGTTGGATCGCTTGTTATTCACCTAGCCAAGCATGTGTTTGGGGCATCTAGAATTGCAGCTACTGCTAGCACATCAAAACTTGAATTTTTGAAGAACTTGGGAGCAGACTTGGCTATTGATTATACTAAAGAGAATTATGAAGAACTTGCAGAAAAATTTGATGTGGTGTATGATGCAGTAGGTGAAAGTGAGAGGGGGCTAAAGGCAGTTAATGAAGGTGGAAAAGTTGTGACAATAGTGCCGCCCGGAACACCGCCGGCTATCCCTTTCGGACTCACTTCAGATGGAGCTTTGTTAGAGAAATTGCAACCTTACTTGGAGAGTGGCAAGGTGAAGCCAATATTGGATCCTAAGAGTCCCTTTCCATTTTCTCAGACTGTGGAAGCATTTTCTCATCTCAATACTAATAGAGCTATTGGGAAAATTGTTATACATCCTATTCCTTGA 963 0.3988 MANTLNIPSNTKVWVYSQYGNIEENLKFDTNVPTPHPKEDQVLIKVVAAALNPVDTKRALGYFKDIDSPLPTVPGYDVAGVVVSVGDQVKKFKVGDEVYGDINEKAIDHPKTVGSLSEYTVAEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERVEFSSGQSILVLGGAGGVGSLVIHLAKHVFGASRIAATASTSKLEFLKNLGADLAIDYTKENYEELAEKFDVVYDAVGESERGLKAVNEGGKVVTIVPPGTPPAIPFGLTSDGALLEKLQPYLESGKVKPILDPKSPFPFSQTVEAFSHLNTNRAIGKIVIHPIP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00230 320 SMART PKS_ER_names_mod 20 316 IPR020843 GO:0016491
Trre11g00230 320 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
Trre11g00230 320 Gene3D - 18 316 - -
Trre11g00230 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 320 IPR044626 GO:0016628
Trre11g00230 320 CDD MDR_like_2 12 316 - -
Trre11g00230 320 Pfam Zinc-binding dehydrogenase 205 316 - -
Trre11g00230 320 Gene3D - 153 267 - -
Trre11g00230 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 259 IPR036291 -
Trre11g00230 320 SUPERFAMILY GroES-like 8 166 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00230 Trre-Chr11 1834335 1836168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00230 67 230 Monolignol Biosynthesis Gene Families AT1G72680 29.167 3.70e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00230 K18980 - gmx:100791274 489.96