Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00207 ATGCCTGAAGGAGGAAGAAAGAGGATACATTTTAGCAAGATATATTCATTTTCTTGTTTTAAATCTTCATATAGAGATGGTCATTCACAAATTGGACAAAAAGGGTATTCAAGAGTTGTTTATTGCAATGATTCTGATAATATTGAAGCAATTCAGTTGAATTATGGTGGAAATTATGTTTCAACTACAAAGTATACAGCTTTTAATTTTATACCAAAGTCATTATTTGAACAGTTTAGAAGGGTTGCAAATATCTACTTTCTTGTTGTTGCTTGTGTTTCATTTAGTCCTTTAGCACCTTATACAGCTTCAAGTATTGCTGCACCTTTGGTAGCTGTGATTGGTGCTACTATGGCCAAAGAAGCTGTGGAAGATTGGAGAAGGAGAAAACAGGATATAGAGGCGAACAACCGAAAGGTTCAGGTATATGGTAGAAACCATACATTTGTGGAGACGAGATGGAAGAAACTTCGTGTTGGTGATGTGATTAAAGTGTACAAGGATGAATACTTTCCTTCTGATCTTCTTCTGCTTTCGTCAAGCTATGAGGACGGTGTTTGCTATGTCGAGACGATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCATGCGATGGAGGTGACAACTCGTCTTAATGATGAAAAATCTCTCCAGAAGTTTAGGGCTATGGTCAAATGTGAAGATCCTAATGAAAATCTGTACTCATTTATCGGAACTTTAAAATATGAGGGTGAAGAATATCCTCTTTCGCTGCAGCAAATCCTTTTAAGAGATTCTAAGCTGAGAAATACCGAATATATCTACGGTGTTGTTATCTTCACTGGTCAAGATACGAAAGTGATGCAGAATTCCATTGATCCTCCATCGAAGAGAAGCAAAATCGAGAGAAAAATGGACGAGATAATCTACATTCTCTTCAGTACCTTGATTTTGATATCATTTATCGGTTCTTTGTTTTTCGGTGTCGATACCCAAAAGGATATTAGCAGTGATGGAAGTTACACAAGATGGTATCTTCATCCGGATGATTCGACCGTGTTTTTTGATCCTAGAAGGGCAGGCCTTGCTTCACTTCTTCATTTTTTGACTGCCCTTATGTTGTATGGATATCTGATTCCGATATCACTTTATGTGTCGATAGAAATTGTGAAAGTTCTTCAGACTATTTTCATCAATCAAGATCAAGAAATGTATTTTGAAGAATCAGATAGGCCGGCTCACGCCCGCACATCTAATTTGAATGAAGAACTTGGTCAAGTTGATACCATATTGTCCGATAAAACTGGTACTTTGACATGTAACTCTATGGAGTTTGTCAAATGTTCCATAGGGGGTATTCCGTACGGTCGTGGTATTACGGAAGTGGAGAAGGCACTTGCTAAGAGAGCGAAGGATGGTGAATCCAAAGGCGATGCTTATTCATCTGATATCTTGAGTCAGGGTGGCGATGTTGTGGACTCTCAGAAGCCAATTAAGGGATTTAACTTTAAAGATGAACGCATAATGAATGGACAATGGATCAATGAACCGCATCCAGACATCATAGAGAAATTCTTTCGAGTTTTAGCTATATGTCATACAGCTATTCCTGATGTAGATAAAGTGTCGGGAGAAATTTCCTATGAAGCTGAGTCGCCAGATGAAGCCGCATTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTTCTAGGACACAAACAAGCATATCGTTGCATGAACTGAATCATGAACGCGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCGCGCAAAAGAATGTCAGTGATAGTGAGAAACGATGAAAATAAAATATTGCTCCTATGCAAGGGTGCTGACAGTGTTATGTTCGAAAGGCTCTCACAACATGGAAGAGAGTTTGAAGCTGAAACAAATGATCATATCAAAAGATATTCTGAGGCAGGTTTACGAACTCTCGTAATCACATACCGTGAACTTGGCGAAGAAGAATATAACAGGTGGGACAAGGAGTTCTCGAAGGCCAAAACTTCTTTAGCAGCAGACCGAGATACACTGGTGGATGCAGCTGCTGACAAGATGGAAAGAGATTTGATACTTCTTGGAGCTACCGCAGTTGAGGATAGGCTTCAAAAGGGGGTTCCTGAATGTATTGAAAAGCTTGCTAAGGCAGGAATCAAGTTATGGGTATTGACTGGGGACAAGATGGAAACTGCGGTGAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAACAAATAGTGATCACACTTGATTCAACGGATATCATATCACTGGAGAAGCAAGGGGACAACGAGGCTCTAAAAAAGGCCTCTCATGAAAGTATCGAGAAACAAATTGAAGAAGGAATCTTGCAAATCAAGTCATCAAAAGAGAGTTCCGATACAGAAAAGGAAAGTTTTTCATTTGGATTGATAATTGATGGGAGGTCATTGGAATATTCTCTCGGCAACGGTTTGGAGAAATCATTCTTTAAGCTGGCTAGTAATTGCGCTACTGTCATATGTTGCCGGTCTTCACCTAAACAGAAAGCTCGTGTTACAAAATTGGTTAAATTGGAAACAGGGAAGACAACTTTAGCTATCGGTGATGGTGCAAATGATGTCGGTATGCTTCAAGAGGCTGATATTGGAGTTGGCATTAGTGGAGCTGAAGGGATGCAGGCCGTAATGGCGAGTGATTATGCAATCGGTCAATTTCGTTTTCTGGAGCGTTTATTGTTGGTACACGGCCACTGGTGTTATAGGCGAATATCAATGATGATATGTTACTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAAGCATATGCTTCATTCTCCGGTCAAGCCGCTTACAACGATTGGTACATGTCGTGTTACAATGTGTTCTTCACTTCACTACCGGTAATCGCTCTAGGTGTTTTTGATCAGGACGTTTCTGCCAGACTATGCCAAAAGCATCCCTTTCTATATCTAGAAGGAGTAGAGAACACACTCTTCAGCTGGACTCGGATTATCGGATGGATGTTAAACGGAGTCATTAGTTCCTTGCTAATCTTCTTCTTAACGACTAACTCCGTCTTAAATCAAGCCTTCACAAAAGACGGACAAGTGGTAGATTTCGAAATACTTGGTGTCATAATGTATACATGTGCAATTTGGGTTGTAAATTGCCAAATGGCACTTTCAATCAACTACTTCACTTGGATCCAACATTTTTTCATTTGGGGTAGTATTGTCATTTGGTATGTTTTCTTGTTGATTTATGGTTATATGTCTCCAATAACATCTACAACAGCTTATAGGGTATTTGTGGAAGCATGTGCTCCTAGTGCTTCATATTGGTTAATAACCCTTTTTGTTGTTATTTGTGTTCTTATACCATATTTTTGTTATAGAGCTTTTCAAAGTAGGTTTTTACCAATGTATCATGATATCATACAAAGAAAACAAGTAGAAGGATCTGAATTTGAGATTTCTGATGAGTTACCTAAACAAGTTCAAGGTAAACTAATAAATTTGAGAGAAAGATTGAAGCAAAGGGAAGGTTGA 3582 0.3878 MPEGGRKRIHFSKIYSFSCFKSSYRDGHSQIGQKGYSRVVYCNDSDNIEAIQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTASSIAAPLVAVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGRNHTFVETRWKKLRVGDVIKVYKDEYFPSDLLLLSSSYEDGVCYVETMNLDGETNLKLKHAMEVTTRLNDEKSLQKFRAMVKCEDPNENLYSFIGTLKYEGEEYPLSLQQILLRDSKLRNTEYIYGVVIFTGQDTKVMQNSIDPPSKRSKIERKMDEIIYILFSTLILISFIGSLFFGVDTQKDISSDGSYTRWYLHPDDSTVFFDPRRAGLASLLHFLTALMLYGYLIPISLYVSIEIVKVLQTIFINQDQEMYFEESDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGITEVEKALAKRAKDGESKGDAYSSDILSQGGDVVDSQKPIKGFNFKDERIMNGQWINEPHPDIIEKFFRVLAICHTAIPDVDKVSGEISYEAESPDEAAFVIAARELGFEFFSRTQTSISLHELNHERGKKVDRVYQLLHVLEFSSSRKRMSVIVRNDENKILLLCKGADSVMFERLSQHGREFEAETNDHIKRYSEAGLRTLVITYRELGEEEYNRWDKEFSKAKTSLAADRDTLVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAKAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSTDIISLEKQGDNEALKKASHESIEKQIEEGILQIKSSKESSDTEKESFSFGLIIDGRSLEYSLGNGLEKSFFKLASNCATVICCRSSPKQKARVTKLVKLETGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDYAIGQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCQKHPFLYLEGVENTLFSWTRIIGWMLNGVISSLLIFFLTTNSVLNQAFTKDGQVVDFEILGVIMYTCAIWVVNCQMALSINYFTWIQHFFIWGSIVIWYVFLLIYGYMSPITSTTAYRVFVEACAPSASYWLITLFVVICVLIPYFCYRAFQSRFLPMYHDIIQRKQVEGSEFEISDELPKQVQGKLINLRERLKQREG 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00207 1193 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1162 - -
Trre11g00207 1193 NCBIfam HAD-IC family P-type ATPase 845 956 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre11g00207 1193 SFLD p-type atpase 407 924 IPR044492 -
Trre11g00207 1193 Pfam Phospholipid-translocating P-type ATPase C-terminal 901 1151 IPR032630 -
Trre11g00207 1193 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 666 IPR023299 GO:0000166
Trre11g00207 1193 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Trre11g00207 1193 Coils Coil 116 136 - -
Trre11g00207 1193 Gene3D - 546 702 IPR023299 GO:0000166
Trre11g00207 1193 CDD P-type_ATPase_APLT_Dnf-like 57 1033 - -
Trre11g00207 1193 NCBIfam phospholipid-translocating P-type ATPase 55 1159 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Trre11g00207 1193 SFLD C1.7: P-type atpase like 407 924 - -
Trre11g00207 1193 Pfam Phospholipid-translocating ATPase N-terminal 40 102 IPR032631 -
Trre11g00207 1193 Gene3D - 107 286 - -
Trre11g00207 1193 Gene3D - 703 913 IPR023214 -
Trre11g00207 1193 FunFam Phospholipid-transporting ATPase 702 913 - -
Trre11g00207 1193 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1151 IPR023298 -
Trre11g00207 1193 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Trre11g00207 1193 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Trre11g00207 1193 FunFam Phospholipid-transporting ATPase 545 703 - -
Trre11g00207 1193 Pfam Cation transport ATPase (P-type) 544 631 - -
Trre11g00207 1193 SUPERFAMILY HAD-like 420 928 IPR036412 -
Trre11g00207 1193 FunFam Phospholipid-transporting ATPase 116 286 - -
Trre11g00207 1193 SUPERFAMILY Calcium ATPase, transduction domain A 143 283 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00207 Trre-Chr11 1638026 1643893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00207 2 1164 Primary Pumps ATPases AT3G25610 64.494 0.0 1588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00207 K01530 - gmx:100817020 2026.52