Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00160 ATGTCATTGTCTTCTTGTGTTCTCTCTTCAAACCTCAAAATGCAAACTTTCTTTGTTTCATCTTCTCCTTCAACACCAAAATTTCACCCTTTTCAAAATTCTCATTATCACTCTTTTTCTTCTTCACCACTGAGACTCACCATTGATGGATTTTCATGCTCATCTTTTTCTTTGTTCCAAACTGTTAGAAAGTCTTCACCTTTTCTCATTTCAAATCCAAAAATTTCATCTTTTAGAGTCTCTGCTGCTTCTGTTCCTGAGGCAAAAAGTGATGAACCAACTCAACCTTCTGAGTTGATTCAGTCTTTGCAACTTGGTTTCATGTTTGCCACTTGGTATCTCTTGAATATTTACTTCAACATTTATAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACTGTTACAGCATTTCAATTTGGATTTGCTTCATTGGTGATTAATTTGATCTGGACTTTGAATCTTCATCCAAGACCAAACATCAGTAAGTCAAAGCTTGTAGCAATACTTCCACTGGCTGTAGCTCATACATTAGGGAACCTGTTGACCAACATTAGTCTCGGGAAAGTTGCTGTTTCTTTCACTCACACCATCAAAGCTATGGAACCTTTCTTCACTGTTGTTCTTTCATCCCTTCTCCTCGGTCAGATGCCAACTTTATGGGTGCTTTCTTCTCTTTTACCTATTGTTGGGGGAGTGGCATTAGCATCAATGACTGAAGTATCTTTCAATTGGATTGGATTCAGCACTGCAATGGCTTCTAACCTTACGAATCAATCACGAAATGTTTTGAGCAAAAAACTAATGGCTAATGAAGAGGACGCGTTGGACAACATCAATCTATATTCAGTTATAACCATCATTTCCTTTTTCCTGTTGTTACCATTTGCTATATTTTTGGAGGGCGTCAAGTTTACTCCTTCATACCTGCAATCTGCTGCAAGCCAAGGATTGAATGTTAGAGAGCTATGCATAAGATCGGTTTTGGCTGCATTCTGCTTCCATGCATATCAGCAGGTTTCATATGGAATATTAGAGAAGGTATCACCTGTGACACACTCGGTAGGAAACTGCGTGAAGCGTGTGGTTGTTATCGTTTCTTCGGTTATCTTCTTCCAAACTCCTGTCTCGCCTATTAATGCACTTGGAACTGCTATTGCACTTGTTGGTGTTTTCTTGTATTCAAGAGCAAAGAGGATTAAGCCAATGCCAAAAACAAATACAGCATAA 1233 0.3852 MSLSSCVLSSNLKMQTFFVSSSPSTPKFHPFQNSHYHSFSSSPLRLTIDGFSCSSFSLFQTVRKSSPFLISNPKISSFRVSAASVPEAKSDEPTQPSELIQSLQLGFMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLVINLIWTLNLHPRPNISKSKLVAILPLAVAHTLGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSSLLLGQMPTLWVLSSLLPIVGGVALASMTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMANEEDALDNINLYSVITIISFFLLLPFAIFLEGVKFTPSYLQSAASQGLNVRELCIRSVLAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALVGVFLYSRAKRIKPMPKTNTA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00160 410 PANTHER SOLUTE CARRIER FAMILY 35 104 400 - -
Trre11g00160 410 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 406 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre11g00160 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 400 - -
Trre11g00160 410 Pfam Triose-phosphate Transporter family 103 396 IPR004853 -
Trre11g00160 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00160 Trre-Chr11 1279411 1283163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00160 78 407 Antiporters AT5G33320 66.667 8.52e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00160 K15283 - gmx:100819280 581.252