Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00118 ATGAATACGACGTCGTTTATGGACAAACAGATAATGGATCTGAATCTACCTCATCATCATGAATCTGCTCATTCTTCTACTTCTACTCCCAACAACGATTTCATCAACCTCATCAAGCCTCGTCATCACGAACAACACGAAGCAGAAGAAGACGATTCGTTGATTCATCACAACAATGGAATCAAAACTGAAGATATCGTTCCTAGCTACGATTTTCAACATATTCGTTCACTTCCTGATTTATCGTTTTCAAAACCTTGGAACTCTGATTCCAACTCCAAAAATTACAGTTCTCTGGATTCTTTTGAACCTGCAAAGGTGGCTGTAGAAAAGGACCAGAGCGTTGTTGATGCTTCAATTTTGTTAGAGATTGATCAAACAATGAAGAAACATATGGACAATTTGCATCATGTTCTGGAAGGTGTTAGTGCGCGGTTAACAGAAGTTGAAACCAGAACTCACAATCTTGAGAGTTCTATGGATGATTTGAAGGTAACTGTTGGAAATAATCATGGAATCACTGATGGGAAATTGAGGCTGCTGGAGAATATTCTTCGCGAGGTGCATACAGGGGTGCATGATATCAAGGACAAGCAAGATATAGTGCAAGCTCAGCTGCAACTGGCAAAATTACAAGTGTCCAAGACAGATCAACAATCTGAAACTCAAACTAGTGTCATACCAGATCCTGTGCAGCAAACTTCATCTGAATCTGCATCTGCTCCCCTGCAAACTCAACAATACTTTCCTTCGCCTGTTAATCTTCCACAACCAATTCATGTGGTTTCTCCCCCTAATGCACCTCCTCAACAGGGTTTGCCACCTCCAGGTCAACTTCCAAATCAATTCTCTCAGATCCCAAACCCAACTGTTCCTCAGAGAGATCAGTACTTACCACCACCCATTCAGTCTCAGGAAATCCCAAATCAGCAATACCAACTGCCTTTAACTCAGCAGTCACATCCTCAACCAGGGGCACCTCCGCATCAACAATATCAGCAGACCCTTCATCCTCAGTACTCTCAGCCATCACCTCATCTACCTCAACAACAGCCACCACATTCATCCGGACCTCATCTACCTCAACAACAGCCACCACATTCATCCGGAAATCCACCTCAAATGCAACCTTCACTAGGTCACCATCTAGAGGAGCCACCTTATGTTCCTTCTCAGAATTATCCTCCCAATCTCCGCCAGCCACCATCTCAGTCACCCAGTGGACCTCCTCCACCTTCCCAACAGTATTATGGGACACCGCCCCAAGGATATGAACCAGCATCGAGTAGATCTGGTTCAAATTATTCTTCTGGATATGGTACATTATCTGGGCCTGCTGAGCCATATCGATATGGCGGGCCACCTCAGTATGGTAGTAAACAACCACAACTACCCACTGCTTCGGTGGCTTCCAGCGGTGGAAGTGGTTACCCACAGCTCCCTACTGCCCGCCCACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCTGGTTCAGGTTCTCCTGGATCTGGTAACAGGGTTGCTGTCGATGATGTAGTTGATAAAGTTGCTACTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGGAAGCTGACAGAGAATGGTCAATCAGTTGATCTAAATACAGTGCTGGATAAGCTTATGAGTGAAGGTGGTGAAATGCAGCAACAAAGAGGTTGGTTTGGTAGGTAA 1710 0.4509 MNTTSFMDKQIMDLNLPHHHESAHSSTSTPNNDFINLIKPRHHEQHEAEEDDSLIHHNNGIKTEDIVPSYDFQHIRSLPDLSFSKPWNSDSNSKNYSSLDSFEPAKVAVEKDQSVVDASILLEIDQTMKKHMDNLHHVLEGVSARLTEVETRTHNLESSMDDLKVTVGNNHGITDGKLRLLENILREVHTGVHDIKDKQDIVQAQLQLAKLQVSKTDQQSETQTSVIPDPVQQTSSESASAPLQTQQYFPSPVNLPQPIHVVSPPNAPPQQGLPPPGQLPNQFSQIPNPTVPQRDQYLPPPIQSQEIPNQQYQLPLTQQSHPQPGAPPHQQYQQTLHPQYSQPSPHLPQQQPPHSSGPHLPQQQPPHSSGNPPQMQPSLGHHLEEPPYVPSQNYPPNLRQPPSQSPSGPPPPSQQYYGTPPQGYEPASSRSGSNYSSGYGTLSGPAEPYRYGGPPQYGSKQPQLPTASVASSGGSGYPQLPTARPLPQAIPTASAVSGGSGSGSPGSGNRVAVDDVVDKVATMGFPRDHVRATVRKLTENGQSVDLNTVLDKLMSEGGEMQQQRGWFGR 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00118 569 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 568 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 418 441 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 213 253 - -
Trre11g00118 569 Pfam UBA-like domain (DUF1421) 513 556 IPR010820 -
Trre11g00118 569 MobiDBLite consensus disorder prediction 459 478 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 317 344 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 213 303 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 345 372 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 317 511 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 283 303 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 493 507 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 257 282 - -
Trre11g00118 569 MobiDBLite consensus disorder prediction 389 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00118 Trre-Chr11 940791 944925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00118 1 284 Trihelix Transcription Factor Family AT5G14540 41.195 2.98e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00118 - - gmx:100777464 658.292