Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00116 ATGTCTTACAAATCACTAAAAGAAGGAGGTTTCACCCAAACTGATGATCAATTCATAGAAATCATCATCGAGAAGTCTTACAAATCACTAGAAAAAGTAGGAGGATTCACCCAAACTGATGATCAATCTGCTGAAAAGGCAGCACAAGAAGGTTTTCTCGGTTTTCTTGTGCTCATGGGCCTAATTTTTTTAGGCTTCATGGCATCAATGACACGGCCTTCGATCGAGTTCAACATAACTGAAGCTTCAATAACCCAATTCAACATCACAAGCAACAACATCTTATATTATAATTTTAACGTCAACATTACAGTAAGAAATTTTGAAAACCGAATACGTGATTTTGAAAGGAAGATGGATGCAATTTCTTCGTATAAAGGTAATCAATTAAATTCAGTGACTATGATACCCTTTACTCTAGGCAGTAAGAATGCAATTAGACTCGAGCCCATAGTGTTTGAAGGGAACAGCTTGATCAAATTGGATCATAAACAACTTGTTGAGTATAATAAGGAGACACAATTGGGAATTTACAACATACATTTCGAATTATCTAAATATATGCAGGATTGTCCAAGTTTGAAAATTCCTATGATTTCCAATGGTAATATGACGCCTACTTTCAAAGTCGTCAAATGCTCGTATAAGCCGGAGTACTAG 660 0.3561 MSYKSLKEGGFTQTDDQFIEIIIEKSYKSLEKVGGFTQTDDQSAEKAAQEGFLGFLVLMGLIFLGFMASMTRPSIEFNITEASITQFNITSNNILYYNFNVNITVRNFENRIRDFERKMDAISSYKGNQLNSVTMIPFTLGSKNAIRLEPIVFEGNSLIKLDHKQLVEYNKETQLGIYNIHFELSKYMQDCPSLKIPMISNGNMTPTFKVVKCSYKPEY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00116 219 PANTHER OS05G0367900 PROTEIN 52 172 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00116 Trre-Chr11 925400 926059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00116 75 216 SNARE and Associated Proteins AT1G32270 28.873 1.33e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00116 - - tpra:123886814 173.711