Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00074 ATGGAGTCACGTTCGCGTATCAATGCAGTTGAATCGATATCAGAGGTTCAGAATTCAGTTTCTGGAGTACCGATACGCCATAGCCTTCCTTTAACATTTGGGATTCCCCGTCCTTCGCGGCCTCCCTTATATAGAAATAACGGCGCAGCTTCTTCTTCTTCCACATGCTTTTTGGAACAAAGACATCATCATAATTATGGAACAAAGAAGGTTCACCATCTAAACAGCTTTGTAATTAATCAGAAGCATTCATATCAAGACCGAAACAATGAAGGATTGCCAACAAAATTGTGCAGCAAGCAACTGTTTGCTGATGATCCAAAGAATTGTGGCTCAAGTTTCGCAGTATTAGAATCCAACAATTGTGTCTTAGTTCCATCAAAACGAGGCGTTGTTAATCAACCAAAGAATTACCATTGTCAGTCAGAGATTAGTTTTTGTCCTAGTCCTCAGAATAGTTTCTATTCAGCCACTCTATATTCGGAAGCGAAACAAAGTTTCACCAATACTGAAGTCAGTGAGTGTGTTAGTGTTGATACTAAGTCGTACGAAAGCGGAGAAGTTTCAAATTCATGTGGTTTTAGTACCGGAAGTGATGTTAGCGACGAAAGCAACACGAGTAGTTTGAGCAGTGCTTTGTATAGACCTCATAAAGCAAATGATATAAGATGGGAAGCGATTCAAGCTATCCGAGCTCGTGATGGGATGTTGGAAATGAGGCACTTTAGGTTGTTGAAGAGATTGGGAAAAGGCGATATAGGAAGTGTATATCTAGCAGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCGAGCTTGCAAGTCGCAAGAAGCATCTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCAACATTATATACACACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGTGACCTTCATGCTATCATGCAAAGACAACCCGGGAAGTATTTCTCGGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTACACATGCTTGGAATCATCTACAGAGACCTTAAACCTGAGAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTTTCCGATTTCGATCTCTCTCTAAGATGCACTGTCAGTCCAACTCTTGTGAAGTCGTCAAACCCGATCGCCGAAAGGAAAACCTCAGGATATTGCATTCAGCCAACATGTGCAATGCAGCCAGACTGCATCCAATCTGCATGCTTTTCACCGCGGTTCCTATCCGGAAAATCCAAGAAAGAGAAAAAGGTCAGATCAAAGTATGACATGCATCATCAAGTGACACCTCTGCCAGAGCTAATCGCTGAGCCAACAAGTGCGCGGTCGATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGAGAAGGACACGGCAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGTCGAACACCATTCAGAGGTTCAGCAAACCGAGCGACACTGTTTAATGTTGTTGGACAGCCTTTAAGGTTTCCGGAATCTCCTACCGTCAGCTTTGCTGCAAGGGATTTGATCAGAGGTTTACTTGTGAAAGAGCCTCAACACCGTCTTGCCTATAGACGTGGAGCTACCGAAATCAAACAGCATCCGTTCTTTCACAATGTAAACTGGGCACTGATCCGTTGCGCTAATCCGCCAGAGGTACCGAGACAAACCATGATGATGAATCCAACCTCAACCGAAAATGAAGTTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1851 0.4306 MESRSRINAVESISEVQNSVSGVPIRHSLPLTFGIPRPSRPPLYRNNGAASSSSTCFLEQRHHHNYGTKKVHHLNSFVINQKHSYQDRNNEGLPTKLCSKQLFADDPKNCGSSFAVLESNNCVLVPSKRGVVNQPKNYHCQSEISFCPSPQNSFYSATLYSEAKQSFTNTEVSECVSVDTKSYESGEVSNSCGFSTGSDVSDESNTSSLSSALYRPHKANDIRWEAIQAIRARDGMLEMRHFRLLKRLGKGDIGSVYLAELSGTRTSFAMKLMNKTELASRKKHLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIMQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPIAERKTSGYCIQPTCAMQPDCIQSACFSPRFLSGKSKKEKKVRSKYDMHHQVTPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFRGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMNPTSTENEVSGNYLDIDFF 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00074 616 SUPERFAMILY Protein kinase-like (PK-like) 222 597 IPR011009 -
Trre11g00074 616 Pfam Protein kinase domain 471 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g00074 616 Pfam Protein kinase domain 243 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g00074 616 Gene3D Transferase(Phosphotransferase) domain 1 469 592 - -
Trre11g00074 616 CDD STKc_phototropin_like 240 592 - -
Trre11g00074 616 PANTHER FLIPPASE KINASE 1-RELATED 106 598 - -
Trre11g00074 616 SMART serkin_6 242 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g00074 616 ProSiteProfiles Protein kinase domain profile. 242 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g00074 616 Gene3D Phosphorylase Kinase; domain 1 240 325 - -
Trre11g00074 616 FunFam serine/threonine-protein kinase D6PK-like 326 393 - -
Trre11g00074 616 FunFam serine/threonine-protein kinase D6PK-like 469 592 - -
Trre11g00074 616 FunFam Serine/threonine-protein kinase D6PK-like 240 325 - -
Trre11g00074 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Trre11g00074 616 Gene3D Transferase(Phosphotransferase) domain 1 326 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00074 Trre-Chr11 571944 574375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00074 141 616 AGC Kinase Gene Family AT3G27580 67.520 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre11g00074 Pkinase 2.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00074 K08286 - gmx:100810909 939.102