Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00072 ATGGGACCTTGGTTTACCAAAATGAACTATTTGGTCACTAGTGACCCTATCAATGTGCATCACATCATGAGCAAATGTTTTGCTAATTATGTTAAGGGTCAAAAGTTTCATGAGATTTTTGAAGCCTTTGGGGATGGAATATTCAACGCTGATTCGGAGATATGGAAATACAATAGGTCACTTTTTCACTCTATTTTCAAAGAGAGAGATTTTGAATTGTTTCAAGAGAAAATTATTCGAAACAAGTTGGACAGAAGCTTAATTCCTATATTGGATCATGTTCAACAAAAAGGGTCAGTTGTGGATCTACAAGACGTCTTCAGTCGTTTCACATTCGATAACATTTGTTATGTGGTTCTCGGATGTGATCCTAATTGTCTTTCGATTGATTTCCCCGAAGTTGCGTGCGAGAAGGCTTTTGACCAAATTGAAGAGTGCATATTCTATAGACATGCTATTCCAAAAGGTGTTTGGATATTGCAAAAATTTCTTCAAGTTGGCCAAGAGAAAAAGATGACCAGAGCATCCAAAGAATTTGATGAATTTATATATGCAAATATAGAGTCCAAAAGAGAGGAGCTAAGAAAAGGTATAAAAAATGATCAAATGGGAGACTTGTTAACAATTTTTATGAAAAAAGAGAAGGAGTCACAAGTAGTTGTACATGATGACAAGTTTCTAAGGGATGCTGCCTTCAATCTCTTTGTAGCTGGGAGAGATACTATAACTTCAGCACTTACATGGTTATTTTATCTTGTAGCTACACACCCTTTAGTAGAAACCAAGATTCTTGAAGAGATTAAAGAAAACTTTGGGAGCATTAATAATATTGAAAAGAAGTTAGGGATTGATGATTTGAAAAAGTTAGTTTATCTTCAAGGTGCTATATGTGAGGCTCTAAGGCTTTTTCCTCCTATACCCTTTGAGACCAAGCAAGCAATTAAAGGTGATACACTCCCAAGTGGACACATTGTTAATCCTAATACAATTATATTTTTTTCTTTGTATTCAATGGGTAGACTTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAGAGGAGGCATTGTTCATAATCCATCTTATAAGTTCTTTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAAGGACTTGTCCTTTATTCAAATTAAGATGATAGCAATTTCAATTTTGTGCAAGTATCGTGTCCTATTGGTGGAAGGTCATGTTCCTTTATTAAGCCATTCAATTGTACTTCTTATGAAGAATGGTTTCAAGGTTAGGATAACAAAGAGAGAAATTTGA 1311 0.3524 MGPWFTKMNYLVTSDPINVHHIMSKCFANYVKGQKFHEIFEAFGDGIFNADSEIWKYNRSLFHSIFKERDFELFQEKIIRNKLDRSLIPILDHVQQKGSVVDLQDVFSRFTFDNICYVVLGCDPNCLSIDFPEVACEKAFDQIEECIFYRHAIPKGVWILQKFLQVGQEKKMTRASKEFDEFIYANIESKREELRKGIKNDQMGDLLTIFMKKEKESQVVVHDDKFLRDAAFNLFVAGRDTITSALTWLFYLVATHPLVETKILEEIKENFGSINNIEKKLGIDDLKKLVYLQGAICEALRLFPPIPFETKQAIKGDTLPSGHIVNPNTIIFFSLYSMGRLEETWGKDCLEFKPERWISERGGIVHNPSYKFFSFNAGPRTCLGKDLSFIQIKMIAISILCKYRVLLVEGHVPLLSHSIVLLMKNGFKVRITKREI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00072 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Trre11g00072 436 CDD CYP86A 1 427 - -
Trre11g00072 436 Pfam Cytochrome P450 7 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 Gene3D Cytochrome P450 1 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00072 436 PANTHER CYTOCHROME P450 10 429 - -
Trre11g00072 436 SUPERFAMILY Cytochrome P450 4 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00072 Trre-Chr11 556281 557591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00072 2 435 Cytochrome P450 AT2G23180 47.285 5.32e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00072 - - aprc:113867564 624.009