Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00070 ATGTTCATCCTTACAATATCTCTAGCTGTGGCTGTCACATTCATCCTCACCTTATTCTTATATGCTTTTCACCAAACAAAATCCATGAAAACCCCTGCCTTCACAAATTGGCCTTTTATTGGTATGTTACCACAAATCCTTTGGAACATATCAGACATCCATGAATATTCAGCTCATTTTTTGAAATCAAAAGGTGGCACAGTTGAGTTCATTGGACCATGGTTTACCAACATGGAGGGTGTAATGACATCTGATCCAATCAATGTTCACCATATCATGAGCAAGAGTTTTGACAACTTTGTGAAAGGTGATTTGTTTCGCGAAATGTTTGAACCTTTTGGCGAAGGAATTTTCACTACGGATTCACATAAATGGAAATACAATAGAACGCTTCTCCAATTTCTCTTCAAACAAAGAAGCTTTGAAGCTTTTCAAGAGAAAATCATTCACAACAAAGTTGAGAAATCATTGATTCCTTTATTGAATCATGTTCAACAACAAAAAGGGTCGGTGGTCGATTTACAAGATGTCTTCAACCGTTTCACATTTGATAATATTTGTTTGATAGTCCTTGGGCATGATCCTAATTGTCTTTCCATTGATTTTCCTGAAGTTGCGGCCGAGAAGGCTTTTAACCAAGCCGAAGAATCCATCTTCTATAGACACACCGTACCGGTGTGTGTTTGGAAGTTACAAAGCTGGCTTCAAATTGGTGAAGAGAAAAAAATGACCGAGGCATGCAAAATATTTGATCAATTCCTATTTTCATGCATAGCTTCAAAGCGGGAAGAGCTTGTGAAAAATTGTAACAAAAATGAAATTGGTGCTGAAAGTGATGATACTCATCATGTTGATTTGCTAACGGCATTGATTAGAGAAGAAAAAAAGAATAAGGATAGTGAATCAAATGGTAACAAATTTCTAAGAGATGCTGCATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCAGCACTTACATGGTTATTTTATCTTGTCGCGACACACCCTTTAGTGGAATCCAAGATTCTTGAAGAGATAAAAGAAAATTTTGGACACAAAGAGAAGCCTTGGATTTTAAGTATTGATGAGGTGAAAAAGCTTGTTTATCTTCATGGTGCTATATGTGAGGCATTAAGGCTTTTTCCACCTATACCTTTTGAGAGAAAGGAAGCCGTTACACCCGATATACTTCCAAGTGGTCATCATGTCTATCCAAATGCAATGATATTGTTTTCTTTGTATGCAATGGGAAGGGATAAAGATATTTGGGGAGAAGATTACTCGGAGTTCAAGCCAGGGAGGTGGATTTCTGAGAGAGGGGGTATTGTTTACGCGCCATCTTACAAATTCTTTAGTTTTAATGCTGGACCTAGGACTTGTTTAGGAAGAGATTTGGCTTTCATTCAAGTTAAGATGATAGCTGCTTCTATTTTGTGGAATTATGGTGTTCATGTTGTGGATATTAATCAAGTCACTCCCAACCTTTCAATTGTACTTCTCATGAAACATGGTCTCAAGGTTAAGATAACTAAAAGGGAAATTTAA 1551 0.3701 MFILTISLAVAVTFILTLFLYAFHQTKSMKTPAFTNWPFIGMLPQILWNISDIHEYSAHFLKSKGGTVEFIGPWFTNMEGVMTSDPINVHHIMSKSFDNFVKGDLFREMFEPFGEGIFTTDSHKWKYNRTLLQFLFKQRSFEAFQEKIIHNKVEKSLIPLLNHVQQQKGSVVDLQDVFNRFTFDNICLIVLGHDPNCLSIDFPEVAAEKAFNQAEESIFYRHTVPVCVWKLQSWLQIGEEKKMTEACKIFDQFLFSCIASKREELVKNCNKNEIGAESDDTHHVDLLTALIREEKKNKDSESNGNKFLRDAAFNLFVAGRDTITSALTWLFYLVATHPLVESKILEEIKENFGHKEKPWILSIDEVKKLVYLHGAICEALRLFPPIPFERKEAVTPDILPSGHHVYPNAMILFSLYAMGRDKDIWGEDYSEFKPGRWISERGGIVYAPSYKFFSFNAGPRTCLGRDLAFIQVKMIAASILWNYGVHVVDINQVTPNLSIVLLMKHGLKVKITKREI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00070 516 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 Pfam Cytochrome P450 33 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 SUPERFAMILY Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Trre11g00070 516 CDD CYP86A 69 507 - -
Trre11g00070 516 Gene3D Cytochrome P450 19 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00070 516 PANTHER CYTOCHROME P450 21 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00070 Trre-Chr11 522398 523948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00070 1 514 Cytochrome P450 AT2G23180 43.217 1.57e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00070 - - tpra:123904061 1010.75