Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00029 ATGTCATTGTATATCCCTCGAAAGTTCTTCAGGATTATGCGAAATGAAGATCTTCAAAACGGAGAAATTAAGGTTCCAAAATCATTTGTGGATTTACATTGGGAAAGTGTATCAAATCCTGTAGTGTTTATTCTCCCAAATGGTGCTGCACAAAAAATATATTGGGGGAAGCGGAATGGTGATATTTGGTTTCAAAAGAATTGGGAAAAATTTGCAAAGTTTCTAAAATTTGGATTTAACGTGTATTTTGAATACATAGGAGGTTCATATTTTAAGATTGAGATATGTGGCGTCAATACATTAGAAATTGATTATTCCAATATCAAATTCATAGATGAAGATGTGAATGATGAGATTAATGGTGTTGAAACTAGAAAAGAAGTTGAAGAAGTTGTTGAAGTGAGTGATGATAGTAATAAGAGTTTAGATGAACATGAAATACCTACACAAACTCGTAAGACCAAAAATGGCAAGAGAAAAATGAATATGGATTCTAATGCTTATCATCAAAATATATCTGGTAATAGAGGAGACATGAATAAGAAGGCTAAAAAATGCTCAACAAGTAAAGGCAATATTAATGGAAGAGATGAAGAAATAGAAGAAGTTGAATTGAGTGATGATATTGATAATAAGAGTTCAGATGATGAAAGTGACATGCCCACACAAATTCAAAGGACAAAAAGTGGCAAATGA 696 0.319 MSLYIPRKFFRIMRNEDLQNGEIKVPKSFVDLHWESVSNPVVFILPNGAAQKIYWGKRNGDIWFQKNWEKFAKFLKFGFNVYFEYIGGSYFKIEICGVNTLEIDYSNIKFIDEDVNDEINGVETRKEVEEVVEVSDDSNKSLDEHEIPTQTRKTKNGKRKMNMDSNAYHQNISGNRGDMNKKAKKCSTSKGNINGRDEEIEEVELSDDIDNKSSDDESDMPTQIQRTKSGK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00029 231 MobiDBLite consensus disorder prediction 200 214 - -
Trre11g00029 231 Gene3D - 5 100 IPR015300 -
Trre11g00029 231 PANTHER B3 DOMAIN-CONTAINING 7 190 - -
Trre11g00029 231 MobiDBLite consensus disorder prediction 178 199 - -
Trre11g00029 231 SUPERFAMILY DNA-binding pseudobarrel domain 7 98 IPR015300 -
Trre11g00029 231 MobiDBLite consensus disorder prediction 163 177 - -
Trre11g00029 231 MobiDBLite consensus disorder prediction 131 231 - -
Trre11g00029 231 MobiDBLite consensus disorder prediction 131 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00029 Trre-Chr11 276686 277687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00029 5 116 B3 DNA Binding Superfamily AT3G18990 27.826 1.59e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00029 - - cam:101508042 187.963