Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g05246 ATGAAATCTCCTCCTCCGTCGAATTATTATTATTATTATGGGATTTGCTTTGGTGGAGGTATGCTTAGTTCCGGCGCTACCCATCTCGCTATAACTCCTCTTGATGTACTCAAAGTCAATATGCAGGTTAATCCCAATAAATATAACAATAATGGAATTGTGTCTGGTCTTGCCACCATTTGGAAACAAGAAGGTTTTTATGCTCTCTGGAGAGGTTGGTCTGCCAAATTATGTGGATACGGTATTCAGGGAGGATTCAAATACGCTCTTTACGAGTATTTCAAGAACAACCTTTATGCCACCGATTCTAACAACAGGACTTCCATATTCTTTCTCAGCGGTTTGTCTGCACAGCTTTTAGCTGATGTTACCCTCGCTCCTTTTGAAGCTGTCAAAATCCGTCTTCAAATTCAACCTAATTTCGCCAAGGGTTTAGCTGATGGCTTTCCATTAGTATACAGAAATGAAGGTCTTGCTGGTTTCTACAGGGGCCTTATTCCATTGTGGAGCCGCAATCTTCCTTTCTCCATGGTCATGTTTTCAACATTTGAGCATTCAGTGGACCTAATATATAAAAATATCATGCATAAAAGAAAGCAGGATTGTTCTACAACACAACAACTTGGCGTGACGTGCTTGGCAGCCTATACAGCTGGTGCTGTCGGTACTGTGATTTCCAACCCTGCTGATAATGTCATGACCAGTCTTTATAAAAAAAAGGCTGAATCTGCTATGCAGGCTATCAACAACATTGGGTTCATAAACCTGTTCACTAGAAGTCTTCCTATTCGTATTGCACTTCTAGGGCCAGTTGTAACTTTGCAGTGGTTTCTCTATGACACTATAAAAGTACTATCTGGACTGCCTACTAGTGGAGGACTTGCAAGAGACCAGGAGGAAGTTAAATTGTAG 912 0.4112 MKSPPPSNYYYYYGICFGGGMLSSGATHLAITPLDVLKVNMQVNPNKYNNNGIVSGLATIWKQEGFYALWRGWSAKLCGYGIQGGFKYALYEYFKNNLYATDSNNRTSIFFLSGLSAQLLADVTLAPFEAVKIRLQIQPNFAKGLADGFPLVYRNEGLAGFYRGLIPLWSRNLPFSMVMFSTFEHSVDLIYKNIMHKRKQDCSTTQQLGVTCLAAYTAGAVGTVISNPADNVMTSLYKKKAESAMQAINNIGFINLFTRSLPIRIALLGPVVTLQWFLYDTIKVLSGLPTSGGLARDQEEVKL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g05246 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 285 IPR018108 -
Trre10g05246 303 SUPERFAMILY Mitochondrial carrier 12 281 IPR023395 -
Trre10g05246 303 Gene3D Mitochondrial carrier domain 15 287 IPR023395 -
Trre10g05246 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 97 IPR018108 -
Trre10g05246 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 189 IPR018108 -
Trre10g05246 303 Pfam Mitochondrial carrier protein 111 193 IPR018108 -
Trre10g05246 303 Pfam Mitochondrial carrier protein 17 99 IPR018108 -
Trre10g05246 303 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 12 295 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g05246 Trre-Chr10 59220342 59222574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g05246 11 303 Chloroplast and Mitochondria Gene Families AT2G17270 66.780 1.77e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g05246 K15102 - fve:101304339 430.639