Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g05221 ATGGGAGTTGGTCGTGAAGTATCAATCTCACTTGATGGAGTGAGAGACAAGAACATTATGCAACTCAAGAAGCTCAATATTGCTCTTTTCCCTGTTCGTTACAATGACAAATACTATTCTGATGCACTTGCTTCCGCTGAATTCACTAAACTAGCTTACTACAGTGACATTTGTGTTGGCGCAATTGCGTGTCGGCTTGAGAAGAAGGAAGGTGGGGGCCAAGTTCGGGTTTACATCATGACTTTGGGTGTTTTAGCGCCTTACCGTGGACTTGGAATTGGAACAAGACTGCTGAATCATGTTCTTGATCTTTGCTCCAAGCAGAACATTTCCGAAGTTTACTTGCATGTGCAGACAAACAATGAAGACGCCATTAACTTTTATAAGAAGTTTGAGTTTGAAATTACAGAAACAATCCAGAACTATTATACAAACATCACACCACCAGACTGCTATGTTCTTACGAGGCACATAGCTCCTAGCCCAACAAAGAAATAA 498 0.4116 MGVGREVSISLDGVRDKNIMQLKKLNIALFPVRYNDKYYSDALASAEFTKLAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTRLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFEFEITETIQNYYTNITPPDCYVLTRHIAPSPTKK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g05221 165 FunFam Putative n-alpha-acetyltransferase 50 6 159 - -
Trre10g05221 165 Gene3D - 5 159 - -
Trre10g05221 165 PANTHER N-ALPHA-ACETYLTRANSFERASE 6 163 - -
Trre10g05221 165 Pfam Acetyltransferase (GNAT) family 45 133 IPR000182 GO:0016747
Trre10g05221 165 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 159 IPR000182 GO:0016747
Trre10g05221 165 CDD NAT_SF 51 116 - -
Trre10g05221 165 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 143 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g05221 Trre-Chr10 58996926 58999023 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g05221 Acetyltransf_1 1.1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g05221 K20793 - gmx:100499961 315.079