Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g05023 ATGGACAATAATTTCTCATGGTTCCCAATCCTTTTGAGTCTTATCCTCTTGATGTTTTTGATCCTAAATGTGACAAAAAGATTCAAAACTAAAGGTAGTAACAAAATTACCTCAAACCTTCCTCCAGGACCTTGGAAGCTACCAATTTTTGGAAGCATTCATCACCTCATTAGCTCCCTACCCCACCATAAAATTAGAAAATTGTCCCAAAAATATGGCCCTCTCATGCACCTACAACTTGGAGATATTTCAGCCATAGTGGTTTCTTCTAAAGAACTTGCCATAGAGAGTCTCAGAGACGACGTTTCTTCTAACCCGGCTGGATTTCATTTGACAATCAACAACATTAAAGCCGTTATTCAGGATATGCTTGTTGGTGCAATTGAGACAACATCAATAACTTTGGAATGGACTTTCTCAGAAATGATGAAAAATCCAAGAGTGCTGAAAAAGGCTCAAGAAGAAGTTAGACAAGCTTGTAATGGAAGGAGAATGTGTCCTGGTATCTTGTTTGCTACACCAAATATAGAACTTCTTCTTGCAAAGTTGCTCTACTATTTTGATTGGGAGCTTCCCTATGGAACTAAGCATGAAAGTTTTGACATGACTGAATCTTTTGGTGTTGCATTAAAAAGGAAAAGTCGTCTATATGTAGTTCCAATTCCTTATATTAATCCTGCAGCACCTCTTGAATAA 696 0.375 MDNNFSWFPILLSLILLMFLILNVTKRFKTKGSNKITSNLPPGPWKLPIFGSIHHLISSLPHHKIRKLSQKYGPLMHLQLGDISAIVVSSKELAIESLRDDVSSNPAGFHLTINNIKAVIQDMLVGAIETTSITLEWTFSEMMKNPRVLKKAQEEVRQACNGRRMCPGILFATPNIELLLAKLLYYFDWELPYGTKHESFDMTESFGVALKRKSRLYVVPIPYINPAAPLE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g05023 231 PANTHER CYTOCHROME P450 71B11-RELATED 161 221 - -
Trre10g05023 231 Gene3D Cytochrome P450 103 160 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05023 231 SUPERFAMILY Cytochrome P450 38 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05023 231 Gene3D Cytochrome P450 26 102 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05023 231 Pfam Cytochrome P450 161 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05023 231 Pfam Cytochrome P450 41 101 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05023 231 Pfam Cytochrome P450 110 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05023 231 Gene3D Cytochrome P450 161 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g05023 Trre-Chr10 57718150 57720183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g05023 161 221 Cytochrome P450 AT3G26180 40.984 1.33e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g05023 - - pvy:116123407 119.783