Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g05006 ATGGACATATCATTCTTACCCTTCCTTTTATTTTCAACAAGTTTAATATTTCTTTTCATCACACAAATTCTAAAATTGGGAAAAAGAATACTAAGGGTCACAAGCAAAACACAAAAAACCATTCCACCTGGACCATGGAACCTTCCTATCATAGGAAGCATTCACCACCTTATTGGTTCTCTACCTCATCATGGTTTGAGAAATTTATCCAAAATACATGGCCCTATAATGCACCTAAAACTAGGTGAAATATCAACCATAATAATTTCTTCACCTGAATTTGCCAAAGAGATTTTTAAAACTTATGATACCATTTTTGCTCATAGACCACACCAAGTTGGTGCAGACATCATGTGTTACGGTTCCACCGACATCGCGACAGCACCTTACGGTAACTATTGGAAACAATTAAGAAGATTATGTTCACAAGAGCTTCTTTGTACAAAACGTGTTAGATCATTTCAATCAATTAGAGAGCAAGAGGTATCAAATTTAATAAAATATATTTCTAATAACATTGGATCATGTATTAACCTTAGTGAAAATGTTGCTTGCATGACAAGTTCAATTACTTCAAGAGCAGCTTTTGGTAAAATATGCAAAGATCAACAAGAGTTTATTCTGTTGATTAAGCAGCTTGTCAAAATTGCTGAAGGGTTTGTTGTTATGGATTTGTTTCCTTCACAAAAGTGGTTACATGTGATAAGTGGAATGAGGCCTAAATTGGAGGAGTTGCATATGAAATTTGATAATATTATTGAAAATATTATTAAGGAGGCTATGACAAAGAAGGGTGATGAAGAGACAATAGAGGGTTTTCTCTCTGTTCTTCTTAGGATTAAAGATTGTGATGATGGCCTTGAATGTCCTTTGACCATAGACAATATCAAAGCTGTAATTTTGGACATGTTTGTTGCTGGAAGTGATACATCATCTGCAATTATAGAATGGGCCATTTCAGAAATGATGAAAAATCCAACAGTAATGATCAAAGCTCAACAAGAAGTAAGAGAACAAATTTGTAGCAAAGGATACATTGATGAAACATCTCTTCAAGAACTAAAATATCTAAAAGCAGTCATCAAAGAAACATTAAGATTACACCCTCCTTTCCCTCTTCTTCTCCCTAGAGAATGTAGAGAAACTTGTGAGATTAAAGGGTACACGATACATGCCGGAGACAAAGTGATAGTAAATGCATGGGCAATTGGAAGAGATCCTGAGTATTGGAGTGAACCAGACAAGTTTATTCCGGAGAGATTTTTGGATTGTTCGATTGATTACAGAGGTTCCAATACTGAATACATACCATTCGGTGCTGGAAGAAGAATTTGTCCTGGTATTTTGTTCGGTGTATCTAGTATTGAACTCTCTCTTGCACAACTTCTCTACCATTATAATTGGGAACTTCCTAGTGGATTAACTATGGAAAATCTAGAAATGACCGAATCTTTGAGTTCCACATCAAGAAGAAAAACCGATTTGATTCTAGTACCTATTTCTTGTTACAATCCTGTACATGCTTCATAA 1530 0.3503 MDISFLPFLLFSTSLIFLFITQILKLGKRILRVTSKTQKTIPPGPWNLPIIGSIHHLIGSLPHHGLRNLSKIHGPIMHLKLGEISTIIISSPEFAKEIFKTYDTIFAHRPHQVGADIMCYGSTDIATAPYGNYWKQLRRLCSQELLCTKRVRSFQSIREQEVSNLIKYISNNIGSCINLSENVACMTSSITSRAAFGKICKDQQEFILLIKQLVKIAEGFVVMDLFPSQKWLHVISGMRPKLEELHMKFDNIIENIIKEAMTKKGDEETIEGFLSVLLRIKDCDDGLECPLTIDNIKAVILDMFVAGSDTSSAIIEWAISEMMKNPTVMIKAQQEVREQICSKGYIDETSLQELKYLKAVIKETLRLHPPFPLLLPRECRETCEIKGYTIHAGDKVIVNAWAIGRDPEYWSEPDKFIPERFLDCSIDYRGSNTEYIPFGAGRRICPGILFGVSSIELSLAQLLYHYNWELPSGLTMENLEMTESLSSTSRRKTDLILVPISCYNPVHAS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g05006 509 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 SUPERFAMILY Cytochrome P450 42 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 CDD CYP71-like 73 495 - -
Trre10g05006 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Trre10g05006 509 PANTHER OS08G0105600 PROTEIN 65 500 - -
Trre10g05006 509 FunFam Cytochrome P450 99A2 31 500 - -
Trre10g05006 509 Pfam Cytochrome P450 42 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05006 509 Gene3D Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g05006 Trre-Chr10 57629055 57631007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g05006 42 504 Cytochrome P450 AT3G26330 40.340 1.17e-124 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g05006 - K23807 gmx:100779851 673.315