Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g05002 ATGGAGTTTCACAACCCTTTCTCTTGTACCTTCATAGCCACCTTTATTTTCCTCTTCATGCTATTCAGAATAGTTAAGAAATGGAGTACTTCTAAAAACTCCATCACTAATTTACCACCAGGACCATGGACACTACCCCTCATAGGAAACATACACCAAATTATCACCAGTTCAATGCCCCATCACTGCTTAAAAATTTTAGCAGAGAAATATGGACCCTTAATGTACCTAAAACTAGGTGAAGTACCATACATTGTAGTTACTTCACCAGAGTTGGCCAAAGAGGTTATGAAAACACAAGACTTAAACTTCTGTGATAGGCCAAACCTTCTTTTGCCTACAATATTTACTTACAATGCTACAGATATTGCATTTTCTCCATACGGAGATTACTGGAGGCAACTACGAAAAATATGCATTGTAGAGCTCTTAAGTTTAAAACATGTCGAATCATTTCGGTCCATACGAGAAGAAGAGGTTTCAAAACTAGTTAAATCAATTTCTACATGTGAAGGATCAATTGTTAATCTCACTGAGAACATATTCTCAATGACATATGGGATAACAGCAAGAGCAGTTTTCGGGAAAAGGACCAAACACCAACAAAAGTTTAAAACTGCGATGGAGGAAGTAGTAAGCTTGTTGGGAGGATTTTGTATTGCTGATTTGCATCCTTCTATTAGAATATTGCTTCAGAGGGTGAGTAGAGCAAAGACTAGACTTGAAAAACTCCATAGAGAAACTGATAAGATATTGCAAGATATCATCAATGATCACAAAAGCAGTCATGGAGATGAAGATGTAGTTGATTTGCTTCTCAAGTTTCAGCATGGTAATATTGATCACTTGCAAAATCACTTGACTGATGACAATATTAAAGCAGTTATTCAGAACTTGTTCACTGCTGGTAGCGAAACATCCTCAGGGACTGTGGTATGGGCGATGTCTGAGATGGTAAAGAATCCAAAGGTGATGGAAGAAGCACAAGCAGAGGTAAGAAGGGTGTTTGATAGAAAGAAGTATGTAGATGAGACAGAGTTGCACCATTTGATATACTTAAAGTCTATTATCAAAGAAACACTGAGACTACACCCTCTTATACCATTGTTGATTCCAAGAGAAAGTAGGGAGAGATGTGAAATCAATGGGTATGAGATCCCAGCTAAGACAAGGGTTGCTGTAAACATTTGGGCCATTGCAAGAGATCCAAGTTATTGGGATGAAGCCGAGAGTTTTAAACCCGAAAGGTTTGTCAATAGTCCAAATGATTTTAAAGGTGCAAACTTTGAATATATTCCATTTGGTGCCGGAAGGAGGATGTGTCCGGGTAAAGCATTTGCTTTACCCAATGTTGAACTGCCTCTTGCTCAGTTACTTTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAGAACGAAGAACTTGACATGAGTGAGTCATTTGGATTTAGTCTAAGAAGAAAAAATGACCTCTATTTGATTCCTATACAAATACTTGATATTCAATTCAAAGGATCAATATACAAATACTGCAACTAA 1539 0.3756 MEFHNPFSCTFIATFIFLFMLFRIVKKWSTSKNSITNLPPGPWTLPLIGNIHQIITSSMPHHCLKILAEKYGPLMYLKLGEVPYIVVTSPELAKEVMKTQDLNFCDRPNLLLPTIFTYNATDIAFSPYGDYWRQLRKICIVELLSLKHVESFRSIREEEVSKLVKSISTCEGSIVNLTENIFSMTYGITARAVFGKRTKHQQKFKTAMEEVVSLLGGFCIADLHPSIRILLQRVSRAKTRLEKLHRETDKILQDIINDHKSSHGDEDVVDLLLKFQHGNIDHLQNHLTDDNIKAVIQNLFTAGSETSSGTVVWAMSEMVKNPKVMEEAQAEVRRVFDRKKYVDETELHHLIYLKSIIKETLRLHPLIPLLIPRESRERCEINGYEIPAKTRVAVNIWAIARDPSYWDEAESFKPERFVNSPNDFKGANFEYIPFGAGRRMCPGKAFALPNVELPLAQLLYHFDWKLPNGMKNEELDMSESFGFSLRRKNDLYLIPIQILDIQFKGSIYKYCN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g05002 512 PANTHER OS08G0105600 PROTEIN 62 496 - -
Trre10g05002 512 FunFam Cytochrome P450 71D8 31 495 - -
Trre10g05002 512 SUPERFAMILY Cytochrome P450 39 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 CDD CYP71-like 70 491 - -
Trre10g05002 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre10g05002 512 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 Gene3D Cytochrome P450 31 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g05002 512 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g05002 Trre-Chr10 57601032 57602768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g05002 16 496 Cytochrome P450 AT5G25140 41.889 1.50e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g05002 - - mtr:11442302 723.391