Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04994 ATGGAGCTTCACAGCCATTTTTCTAATTTTACCTTCATGCATATGGCATCCTTTCTTCTCTTCCTTTTGTTGCTATTCAAAATAGTTAAAAGATGGAATACCTCTAATAATTCCATCACCAATTTACCACCAGGACCATGGACACTTCCCCTCATAGGAAACATACATCAGATTATCAGCCACTCACTTCCTCATTATTCCTTGAAAAATTTGGCAGAAAAATATGGACCTTTAATGCATATAAAACTAGGAGAGGTATCATACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTTTGAAAACACATGACCTCACCTTTTGTGATAGACCAAAGCTTCTTTTGTCCACAATATGGAGTTACAACAATACTGATATTATATTCTCTCCATATGGAGAACATTGGAGGCAAATACGAAAGATATGTGTTATTGAGCTATTAAGCGTAAAGCGTGTCCAATCATTTAGGCACATAAGAGAGGAAGAGGTATCGAATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAATTGTTAATCTCACTCATAAGATTTCCTCAATGACATATGGAATAACAACGCGTGCGGCTTTTGGTAAAAAGAGCAAACACCAACAAGCGTTCAAGTTAGCAATCGAGGAAATAGCACGTTTGTTGGGAGGATTTTGTATTGCTGATTTGTACCCTTCTGTTAAAATACTTCAAAGGGTGAATAGGACGAAGACCAAAGTTGAAAAGATTCATAGAGAGATCGATATGATATTGCAAGACATCATCGACGATCACAGAAGCACTCCCAAGGAAGCAAATAAGGATGAAGATCTAGTTGATGTTCTTCTCAAGATTCAACAGGAAAATGATCATTCACAACATTCATTGACTGATGATAATATGAAATCAATCATTCAGGACATGTTCGGTGCTGGTTCTGAAACATCGTCAAATTTAGTGTTATGGGGGATGTCTGAGATGGTAAAGAATCCAAAAGTAATGGAAGAAGCACAAGCCGAAGTAAGAAGAGTATATGATAGAAAGGGATATGTGGATGAGACAGAGTTGCACCAATTGATATATTTAAAGTATGTCATCAAAGAAACATTGAGGTTGCATCCTATTGCTCCATTGTTAGTTCCAAGAGAAAGTAGGGAGAGATGCCAAATCAATGGTTTTGAGATCCCAGCGAAGACGAGGGTCCTTATCAATGCTTGGGCCATTGGAAGAGATCCAAAATATTGGGTTGAACCTGAAAGTTTTAAACCTAAGAGATTTGTCGATAGCCTGATTGATTTCAAAGGCAATGACTTTGAATTCATACCATTTGGTGCCGGAAGAAGAATGTGTCCGGGCATAGCATTTGCCCAACCCAATCTTGAATTGCCACTTGCTATGTTGCTTTACCACTTTGATTGGAAACTTCCCAACAAAATGAAAAATGAAGAACTAAATATGACTGAGTCATTTGGATTTACATCAGAAAGAAAACATGACCTATGCTTGATTCCTATAACTCGTCGTCTTTGA 1521 0.3734 MELHSHFSNFTFMHMASFLLFLLLLFKIVKRWNTSNNSITNLPPGPWTLPLIGNIHQIISHSLPHYSLKNLAEKYGPLMHIKLGEVSYIIVSSPEMAKEILKTHDLTFCDRPKLLLSTIWSYNNTDIIFSPYGEHWRQIRKICVIELLSVKRVQSFRHIREEEVSNLVKSISASEGSIVNLTHKISSMTYGITTRAAFGKKSKHQQAFKLAIEEIARLLGGFCIADLYPSVKILQRVNRTKTKVEKIHREIDMILQDIIDDHRSTPKEANKDEDLVDVLLKIQQENDHSQHSLTDDNMKSIIQDMFGAGSETSSNLVLWGMSEMVKNPKVMEEAQAEVRRVYDRKGYVDETELHQLIYLKYVIKETLRLHPIAPLLVPRESRERCQINGFEIPAKTRVLINAWAIGRDPKYWVEPESFKPKRFVDSLIDFKGNDFEFIPFGAGRRMCPGIAFAQPNLELPLAMLLYHFDWKLPNKMKNEELNMTESFGFTSERKHDLCLIPITRRL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04994 506 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre10g04994 506 CDD CYP71-like 74 497 - -
Trre10g04994 506 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 FunFam Cytochrome P450 71D8 35 501 - -
Trre10g04994 506 PANTHER CYTOCHROME P450 71B11-RELATED 24 502 - -
Trre10g04994 506 Gene3D Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 Pfam Cytochrome P450 43 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04994 506 SUPERFAMILY Cytochrome P450 43 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04994 Trre-Chr10 57546125 57548788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04994 18 502 Cytochrome P450 AT5G25120 41.667 3.85e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04994 - - mtr:11442302 795.423