Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04988 ATGAAAACACATGACATCAACTTCTGTGATAGGCCAAACCTTCTTTTGTCGACACTATGGAGTTACAATGCTACGGATATAGTCTTCGGTACATACGGAGAACATTGGAGGCAACTCAAAAAGATATGCGTTGTAGAGCTATTAAGTGAAAAACGCGTCCAATCATTTCGGTCCATAAGAAAAGAAGAGGTGTCGAATCTTGTTAAATCAATATTTGAAAGTGAAGGATCTGTTGTTAATCTCACTCAAAAGATTATCTCATTGACAAATGGGATAACAGCGCGAGCAGCTTTTGGAAAAAGGAATAGACACGAAAAAGTGTTCATATCAGCAATGGAAGAAATATTAAGACTATTTGGAGGATTTTGTATTGCAGATTTGTATCCATCGATTAAAATGCTTCAAATGTTGAGTTTGTCGAAGAACCAACTTGTAAAACTTCAAAGAGAGTTTGATATCATAATGCAAGATATTATTGATGACCACAAATGCAGTCACAAGGAAGCAAGCAAGGAATATGATCTAGTTGATGTTCTTCTCAAGATTCAACGAGAAAATGATCGCTCACAACATGTCTTGACCAATGAAAATATAAAATCAATCATTCAGGACATGTTCGCTGCTGGTACTGAACCATCGTCACAGGTTGTGCTATGGGGGATGTCTGAGATGGTAAAGAATCCAAAGTTACTTTATCACTTTGATTGGAAGCTTCCGAATGGAATGAAGAATGAAGAATTGGATATGACTGAGTTATTTGGGCTTGGTGTGGGAAGAAAACATGACCTATGCTTAATTCCTATTACTCGTCGTCCTTAA 819 0.37 MKTHDINFCDRPNLLLSTLWSYNATDIVFGTYGEHWRQLKKICVVELLSEKRVQSFRSIRKEEVSNLVKSIFESEGSVVNLTQKIISLTNGITARAAFGKRNRHEKVFISAMEEILRLFGGFCIADLYPSIKMLQMLSLSKNQLVKLQREFDIIMQDIIDDHKCSHKEASKEYDLVDVLLKIQRENDRSQHVLTNENIKSIIQDMFAAGTEPSSQVVLWGMSEMVKNPKLLYHFDWKLPNGMKNEELDMTELFGLGVGRKHDLCLIPITRRP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04988 272 PANTHER OS08G0105600 PROTEIN 229 270 - -
Trre10g04988 272 Gene3D Cytochrome P450 1 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04988 272 Pfam Cytochrome P450 15 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04988 272 SUPERFAMILY Cytochrome P450 2 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04988 272 PRINTS E-class P450 group I signature 88 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04988 272 PRINTS E-class P450 group I signature 217 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04988 272 PRINTS E-class P450 group I signature 197 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04988 Trre-Chr10 57502813 57504189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04988 1 231 Cytochrome P450 AT3G26210 34.583 2.88e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04988 - - mtr:11442302 330.102