Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04987 ATGGAACTTCACAATAATTTTTCTTTTATTATTACCTTCATTTCCTCCTTTCTCTTCCTCTTGGTGCTATTCAAAATAGTTACAAGATGGAGTGATAACAATTCCACAGTCAATTTACCACCAGGACCATGGAAATTGCCTTTCATAGGAAACATACACCAGATTATCAGCAGCTCATTGCCCCACCATCGCTTCAAAAATCTGGCCGAGAAATATGGACCCTTAATGCATCTAAAACTAGGAGAGGTATCGTACATAATAGTTAGTTCACCAGATATTGCCAAAGAGATTATGAAAACACATGACATCAACTTCTGTGATAGGCCAAACCTTCTTTTGTCGACACTATGGAGTTACAATGCTACGGATATAGTCTTCGGTACATACGGAGAACATTGGAGGCAACTCAAAAAGATATGCGTTGTAGAGCTATTAAGTGAAAAACGCGTCCAATCATTTCGGTCCATAAGAAAAGAAGAGGTGTCGAATCTTGTTAAATCAATATTTGAAAGTGAAGGATCTGTTGTTAATCTCACTCAAAAGATTATCTCATTGACAAATGGGATAACAGCGCGAGCAGCTTTTGGAAAAAGGAATAGACACGAAAAAGTGTTCATATCAGCAATGGAAGAAATATTAAGACTATTTGGAGGATTTTGTATTGCAGATTTGTATCCATCGATTAAAATGCTTCAAATGTTGAGTTTGTCGAAGAACCAACTTGTAAAACTTCAAAGAGAGTTTGATATCATAATGCAAGATATTATTGATGACCACAAATGCAGTCACAAGGAAGCAAGCAAGGAATATGATCTAGTTGATGTTCTTCTCAAGATTCAACGAGAAAATGATCGCTCACAACATGTCTTGACCAATGAAAATATAAAATCAATCATTCAGGACATGTTCGCTGCTGGTACTGAACCATCGTCACAGGTTGTGCTATGGGGGATGTCTGAGATGGTAAAGAATCCAAAGTTACTTTATCACTTTGATTGGAAGCTTCCGAATGGAATGAAGAATGAAGAATTGGATATGACTGAGTTATTTGGGCTTGGTGTGGGAAGAAAACATGACCTATGCTTAATTCCTATTACTCGTCGTCCTTAA 1110 0.3712 MELHNNFSFIITFISSFLFLLVLFKIVTRWSDNNSTVNLPPGPWKLPFIGNIHQIISSSLPHHRFKNLAEKYGPLMHLKLGEVSYIIVSSPDIAKEIMKTHDINFCDRPNLLLSTLWSYNATDIVFGTYGEHWRQLKKICVVELLSEKRVQSFRSIRKEEVSNLVKSIFESEGSVVNLTQKIISLTNGITARAAFGKRNRHEKVFISAMEEILRLFGGFCIADLYPSIKMLQMLSLSKNQLVKLQREFDIIMQDIIDDHKCSHKEASKEYDLVDVLLKIQRENDRSQHVLTNENIKSIIQDMFAAGTEPSSQVVLWGMSEMVKNPKLLYHFDWKLPNGMKNEELDMTELFGLGVGRKHDLCLIPITRRP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04987 369 Gene3D Cytochrome P450 32 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04987 369 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 16 327 - -
Trre10g04987 369 SUPERFAMILY Cytochrome P450 38 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04987 369 Pfam Cytochrome P450 40 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04987 369 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04987 369 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04987 369 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04987 369 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04987 369 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04987 Trre-Chr10 57502522 57504189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04987 8 348 Cytochrome P450 AT1G13110 33.807 5.58e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04987 - - mtr:11442302 468.003