Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04986 ATGGAGTTTCAATTCCCTTTTTCTAATATTACCTTTATAGCATCCTTTCTGATCTTGATCTTGGTGTTAATCAAAATAGTTAAAAGACAAAGTTGTAACAATTCTACTAACAATTTACCACCAGGACCATGGAAACTACCATTCATAGGAAACATACATCAGGTTATCAGTAGCTCATTGCCTCATCACTGTTTCAAAGATTTGGCAGAGAAATATGGACCCTTAATGCACTTAAAACTAGGAGAGGTATCATATATATTAGTTAGTTCACCAGATATGGCCAAAGAGATTATGAAAACAAATGACCTTATCTTTTGTGATAGGCCAAACCTTCTTTTATCCACAATACTTGGTTACAATGCTACAAATATCGCCTTCTCTACATATGGAGAATATTGGAGGCAACTACGAAAGATATGTGTTATAGAGCTATTAAGTGCGAAACGTGTTCAATCATTTAGGTACATAAGAGAAGAAGAAGTGTCGAACCTTGTTAAATCAATATCTGCAAGTGAAGGATCAGTTGTTAATCTCACTCAGAAGGTTATGGCAACGACATATGGGATAACAGCGCAGACAGCTTTTGGGAAAAGGAATATACATCAAGAAGCGTACAAATTAGCAATCGGGAAAGCATTGAGCCTGTTGGGAGGAGTTTGTATTGTTGATTTGTATCCTTCTATTAAAATGCTTCGAAAGATGAGTAGGGCGAAGACCAAACTTGAAAAAGCTACAAGAGATCTTGATGTAATATTGCAAGACATCATCGATGATCATAGAAGTAGTCGTAGAGAAGAAAGCAAGGATGAAGATTTAGTTGATGTTCTTCTCAATATTCAACAAGAAAATTATCACACACAGCATCCCTTGACCGATGATAATTTGAAAGCAGTCATCCAGGATTTGTTCACCGGTGGTGGAGAAACAACGTCGGGGGCAGTGTTATGGGGAATGTCTGAGATGGTAAAGAATCCAAAGGTAATGGAAAAAGCACAAGCTGAGGTAAGACGAGTGTTTGATAAAAACGGCTATGTGGATGAGACAGAGATGCACCAATTGATATACTTAAAGAATGTCATCAAAGAAACACTAAGGATGCATCCTACTGCACCATTGTTAGTTCCAAGAGAAAGTCGAGAGAGATGCCAAATCAATGGGTATGAGATCCCAGCTAAGACAAGGATCATGGTTAACGCTTGGGCTATTGGAAGAGATCCAAGGTATTGGGTTGAAGCCGAGAGTTTTAAACCTGAGAGGTTTGTTAATAGCCCTATTGATTTCAAGGGTACAGACTTTGAATATATACCATTTGGTGCGGGAAGGAGGATGTGTCCTGGCATTGCATTTGCCATACCTAGCATTGAACTGCCTCTTGCTCAGTTACTTTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAGAACGAAGAACTTGATATGACCGAGTCATTTGGGCTTACTGTAGGAAGAAAACATGATCTATGCTTGATTCCTATTACTCGTCATACTTAA 1512 0.3843 MEFQFPFSNITFIASFLILILVLIKIVKRQSCNNSTNNLPPGPWKLPFIGNIHQVISSSLPHHCFKDLAEKYGPLMHLKLGEVSYILVSSPDMAKEIMKTNDLIFCDRPNLLLSTILGYNATNIAFSTYGEYWRQLRKICVIELLSAKRVQSFRYIREEEVSNLVKSISASEGSVVNLTQKVMATTYGITAQTAFGKRNIHQEAYKLAIGKALSLLGGVCIVDLYPSIKMLRKMSRAKTKLEKATRDLDVILQDIIDDHRSSRREESKDEDLVDVLLNIQQENYHTQHPLTDDNLKAVIQDLFTGGGETTSGAVLWGMSEMVKNPKVMEKAQAEVRRVFDKNGYVDETEMHQLIYLKNVIKETLRMHPTAPLLVPRESRERCQINGYEIPAKTRIMVNAWAIGRDPRYWVEAESFKPERFVNSPIDFKGTDFEYIPFGAGRRMCPGIAFAIPSIELPLAQLLYHFDWKLPNGMKNEELDMTESFGLTVGRKHDLCLIPITRHT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04986 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Trre10g04986 503 CDD CYP71-like 71 494 - -
Trre10g04986 503 FunFam Cytochrome P450 71D8 32 498 - -
Trre10g04986 503 Coils Coil 234 254 - -
Trre10g04986 503 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PANTHER OS08G0105600 PROTEIN 63 501 - -
Trre10g04986 503 Pfam Cytochrome P450 40 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 Gene3D Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04986 503 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04986 Trre-Chr10 57499056 57500721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04986 17 501 Cytochrome P450 AT3G26280 41.365 1.15e-133 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04986 - - mtr:11442302 792.727