Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04982 ATGCAAGCCTTATGGTTGTCCTTGAAAGACAATGTCAAATGTGGTAACAAGCTCACTGATGTAATAATAAGGATGCCACCAAAATTTGGTAAAGGAAGTAGCTATGTTTCAGAAAAGGAGGACAAATTCAACAATGAGGAAGAAGAAGAAGAAGATAACGTTCCCTTCATGAAAACTCCAGCTAGACTAGCTTTTTCCATGCCGAACAACAAACAAGCACGACTTTATGAGCTTGGTATTGGAGATCCATCAAGAAAAATTGTTGAGATGATATTTCAGAAAGCATGGATGAACACATCAAAGCCACTAAGAAAGGTTAGAACAGTTCTTAGGGTGAGATACTCACAAGAAGTTCTTGAAAGGTTTGAGAATTACAGAGAAAAAGTGAAGAAACAGTATCCAAGACATCCAAGAAGCACAGTAGATGGAAATGAATTGTTGAGATTCTTTGTCACTACAATGAGATGTTTCCCTGTGAAGAAAGTTCATGATCTTTGTAAAGATCCGTTGTGTCGTTTTTGTCAAATAATTCAATTTAATTTCAATGCGGAAAAGGAAGAGATTCAGTTGAGTAACAGAAAAAGTGTAAATGCAAGAGTGAAGAATGTGAAAAGAGTTTCAATAGTTTGCAGAATAATTGCTGGAACTGCAGTGAATGAAGTTGATGGTAAATATGAAGAAGAGTTTGAGAATGATTCAACAAAGCTAGGTGAAATGCAATTTAGCTTAGAAAAATTTGTAGTGAAAAATCCTAGTTCTATTCTTCCTTGTTTTGTCATAATTTTCAGCTAG 792 0.351 MQALWLSLKDNVKCGNKLTDVIIRMPPKFGKGSSYVSEKEDKFNNEEEEEEDNVPFMKTPARLAFSMPNNKQARLYELGIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVRYSQEVLERFENYREKVKKQYPRHPRSTVDGNELLRFFVTTMRCFPVKKVHDLCKDPLCRFCQIIQFNFNAEKEEIQLSNRKSVNARVKNVKRVSIVCRIIAGTAVNEVDGKYEEEFENDSTKLGEMQFSLEKFVVKNPSSILPCFVIIFS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04982 263 Gene3D - 73 263 - -
Trre10g04982 263 MobiDBLite consensus disorder prediction 34 53 - -
Trre10g04982 263 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 70 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04982 Trre-Chr10 57478073 57479193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04982 56 261 C2H2 Transcription Factor Family AT5G54630 33.617 1.30e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04982 - - tpra:123921169 468.388