Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04976 ATGAAGAACACAATAGATTTTTCAATGGTTCAATTTCTAAGGAGGCTATTTCACTTTTCTATCATAACTATTTTCTCTATGATCATGTTATGTTCAGGAGGTGAGTTATCATCATCAGAGTCTCATTCTTTCTATAGTTTCCTAAAAGCTATTGATCACAATAATGTACTTAACATTAGCAAGATATCATATCCATGTTTGATCAATGGTGTAAGATGCAATTCAAATGCTACAAATATTGTAGAGATAAGGCTTGATAACATGAACCTTAGTGGCATATTTGATGCATATTCACTATGTAGACTCCAAAAGCTAAAAGTGGTTAGTTTAGCAAACAATAATATCAAAGGGACTATTTCAAGCTCAATTTTGCATTGTAGAAGATTGGTACATTTAAATGTAACAAATAATCAATTGAGTGGTAGGTTACCAAAGTCTTTAAGAAGATTGAAATATCTTAAGAACTTAGATGTATCTAAGAATAATTTTTCTACTAATTATATGGCTCAAATTAGTAAGTTAGAGAGCATAAGTGATTTAGATCATACAATACAACCAACACCAAGTCTTTTAACTTCCAATAACACATCTAAAAAACCAAGACCATGGTATGAAAATATTGAAATCTTGTTAGGGTTGGGTTTGGGAGTTGGATTGCTTTTATTATCACTCTACTTTATGGTAAAGAAATCTTCCAAATTAATTGAAGAGATTGAGCTGAAGAAAAACCATCTTGATTCTCCTATAAAAAAGCCTACAATTCAAGAGGTGAAATTAAAAGGAGATAATTGTAATTCAGAACTTGTGTTCTTTGTTGAAGATCATGAAAGGTTCAAACTTGAGGATTTATTAAGAGCTAAAGCTGATTTGAGAAGTGAAAATTTTTGGAGTAGTCTTTTCAAGGTGAAACTTGAGAATAAAGTTGAATATGCTGTCAAAAGATTGAAGAATATGCAGGTATCTTGTGATGAATTTGAAGAAACATTGAGGAAGATAAGTAAAGTGAAACATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCTACCAATGAAGAAAAACTTATCATTTACAAATATCAAAGCAATGGAAGTTTGCTCAATCTCTTAAATGATTATATAGCAAGAAGAAAAGATTTCCCATGGAAACTTCGTCTCAATATAGCATGCGGAATCGCAAGGGGATTAGCATTCATTTATAAGAAATTGGATGAAGGGGAGGCCAATATTATTCCTCATGGAAACATCAAGCTATCAAATATTCTTCTAAATGACAAAAATGAAGCACTAATAGGTGAACATGGTTTATCGAAATTCTTTGAACCACATAGAGGTACTAATCTCTTTTCCTCTGATGGATACACAGCTCCTGAAAAGAGTTTAACCGAAAAAGGCGATGTATATAGCTTCGGAGTGATTCTACTAGAACTACTAACAGGACAAAGCATAGAAGTTAGTAGAATAGACCTTGTTAGATGGGTGAGGTCAATGGTGAGAGAAGAATGGACAGGTGAAGTGTTTGACAAGGAAGTTAGAGAAAATGATCATCAAGGTGCATTTTCATTGTTGAATATTGCTCTCTTGTGTGTGTCGCGTTCTCAAGAAAATAGGCCAAATGTTGAAGAAATTTTGAACACAATTGAAGGTGTGATGAATGCACATGAACAACAACAACAACAGATGGAACTTTCTGCTTCAAAATGTTGTTCTAATGGAACCAATCAAGAATGTTGTTCACTTCATCAAATCATACCTGATACATGGGATTCTCCTGGATCAAATTATTGA 1785 0.3283 MKNTIDFSMVQFLRRLFHFSIITIFSMIMLCSGGELSSSESHSFYSFLKAIDHNNVLNISKISYPCLINGVRCNSNATNIVEIRLDNMNLSGIFDAYSLCRLQKLKVVSLANNNIKGTISSSILHCRRLVHLNVTNNQLSGRLPKSLRRLKYLKNLDVSKNNFSTNYMAQISKLESISDLDHTIQPTPSLLTSNNTSKKPRPWYENIEILLGLGLGVGLLLLSLYFMVKKSSKLIEEIELKKNHLDSPIKKPTIQEVKLKGDNCNSELVFFVEDHERFKLEDLLRAKADLRSENFWSSLFKVKLENKVEYAVKRLKNMQVSCDEFEETLRKISKVKHQNILPLVGYRSTNEEKLIIYKYQSNGSLLNLLNDYIARRKDFPWKLRLNIACGIARGLAFIYKKLDEGEANIIPHGNIKLSNILLNDKNEALIGEHGLSKFFEPHRGTNLFSSDGYTAPEKSLTEKGDVYSFGVILLELLTGQSIEVSRIDLVRWVRSMVREEWTGEVFDKEVRENDHQGAFSLLNIALLCVSRSQENRPNVEEILNTIEGVMNAHEQQQQQMELSASKCCSNGTNQECCSLHQIIPDTWDSPGSNY 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04976 594 PANTHER OS05G0588300 PROTEIN 23 181 - -
Trre10g04976 594 SUPERFAMILY Protein kinase-like (PK-like) 298 546 IPR011009 -
Trre10g04976 594 ProSiteProfiles Protein kinase domain profile. 285 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04976 594 SUPERFAMILY L domain-like 64 207 - -
Trre10g04976 594 Gene3D Phosphorylase Kinase; domain 1 252 359 - -
Trre10g04976 594 Gene3D Ribonuclease Inhibitor 40 209 IPR032675 -
Trre10g04976 594 Pfam Protein tyrosine and serine/threonine kinase 303 545 IPR001245 GO:0004672|GO:0006468
Trre10g04976 594 Coils Coil 539 559 - -
Trre10g04976 594 Gene3D Transferase(Phosphotransferase) domain 1 361 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04976 Trre-Chr10 57430604 57432759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04976 21 547 Receptor kinase-like Gene Family AT5G53320 31.959 2.88e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre10g04976 PK_Tyr_Ser-Thr 2.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04976 - - gmx:100807491 729.169