Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04929 ATGAATCAGAACCTTATGATGATGATGATGAATCAGAACCTCATAGCGAGTGTGGCGACCTGCGCAGCCCCTTCCCGTTGGCGTTTGTCCCAAAATAATGTTAGGCTCAACTATTTGGCTATGGGGGGACGATTGAGTACCTGGGGTATTCTTGATAACTATCGGATTTTGGTATACGAATTTTTTACCAAGGGAAGTTTGGACAATCATTTGTTTAGAAGGATTTCTAACTTTGAGCCACTCTCTTGGAAAATCCAAATGAAGATAGCTCTTGATGCTGCTAAGGGTTTTGCATTTCTTCATAGTAATGAAGTGGAAGTGATACATGGAGGCTTCAAAACTTCTAAGATCATGATTGATTCAAAAACTATAATGCGAAACTCACTACAAGAAAATTGTCACTTTGCGACATTTCAATTGCGACCTTTGAAGATAACCGTCGCAAGTTTGTTGTTTTCATCTCAACTTCGTTGGTCTCTTGTTGAGCAAAGTATTGATTTTATACGAGCCTCACATCTCTATCGTTCCTCACAGATCTTGTGTCGTGACTTGTTTGTTCTCCGTCCGCTGATCCGTCACTCTCACTCGTCATCTTTCTATGTGCTTCTCTCTAGTTGGTATCTTTTTATTTTGGAAGGTGGTCTTGATCATAATTTGGATTATATAATTTTTCTTTTGGTGTTGGATGCTCCCTGCCACATGGGAACTCTAGGTACATGGTCAAAGAAATTAGCATTTCCCAGCCCCATTTATGTAAGGCAACAAACATAG 771 0.3995 MNQNLMMMMMNQNLIASVATCAAPSRWRLSQNNVRLNYLAMGGRLSTWGILDNYRILVYEFFTKGSLDNHLFRRISNFEPLSWKIQMKIALDAAKGFAFLHSNEVEVIHGGFKTSKIMIDSKTIMRNSLQENCHFATFQLRPLKITVASLLFSSQLRWSLVEQSIDFIRASHLYRSSQILCRDLFVLRPLIRHSHSSSFYVLLSSWYLFILEGGLDHNLDYIIFLLVLDAPCHMGTLGTWSKKLAFPSPIYVRQQT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04929 256 Gene3D Transferase(Phosphotransferase) domain 1 43 140 - -
Trre10g04929 256 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04929 256 Pfam Protein tyrosine and serine/threonine kinase 53 125 IPR001245 GO:0004672|GO:0006468
Trre10g04929 256 PANTHER OS01G0588500 PROTEIN-RELATED 52 122 - -
Trre10g04929 256 SUPERFAMILY Protein kinase-like (PK-like) 48 123 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04929 Trre-Chr10 57107996 57112627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04929 52 128 Receptor kinase-like Gene Family AT5G38990 39.241 2.48e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre10g04929 PK_Tyr_Ser-Thr 7.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04929 - - gmx:100305440 108.997