Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04892 ATGCTCATCCCTACCAGGAACCCTTTCAACACCGTCTTCGATGCCAAGCGTTTGATTGGAAGGAAATTCTCTGATGCTTCCGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTAATTGCTGGTCCGGGTGACAAGCCAATGATTGTTGTTAGCTACAAGAATGAGGAGAAGCAACTCACTGCTGAGGAGATTTCCTCCATGGTCCTCATCAAGATGCGTTCGAAAGATCGGAGAGGGGAAGGTGCTATGGCGCACATGGTGACAGCAACTTCAAGTATGACTGGCTCTTTAGGACCGTCCTTATCGGAGCGAAGGATGATAAAGAGTCCTTGGAGTTTAAATTATAACTCTCAAATCTCAAATCCAATTGAGCATTTGCCTAGGAAGATTGATTCAATTGCCACTCTTCTCTGA 417 0.4556 MLIPTRNPFNTVFDAKRLIGRKFSDASVQSDMKLWPFKVIAGPGDKPMIVVSYKNEEKQLTAEEISSMVLIKMRSKDRRGEGAMAHMVTATSSMTGSLGPSLSERRMIKSPWSLNYNSQISNPIEHLPRKIDSIATLL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04892 138 Gene3D - 13 68 - -
Trre10g04892 138 PANTHER HEAT SHOCK PROTEIN 70KDA 10 77 IPR013126 GO:0005524|GO:0140662
Trre10g04892 138 FunFam Heat shock 70 kDa protein 13 68 - -
Trre10g04892 138 Pfam Hsp70 protein 5 76 IPR013126 GO:0005524|GO:0140662
Trre10g04892 138 SUPERFAMILY Actin-like ATPase domain 5 76 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04892 Trre-Chr10 56861837 56864184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04892 7 74 Calmodulin-binding Proteins AT5G02500 82.353 1.75e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04892 K03283 - oeu:111388950 125.561