Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04845 ATGGAAGAAAAAGATTTTACATCAAAACTTTTAGGGTTTGTTGGCAATGAGTGTATAGTCCTTGAGTCCTTGCTACTTATCAATGATCCATTGTATGGTGCTCTTCATTCAAAGAACAGTATCCCTATTCCTATTTCTGAAAGCAACCATCAAGCTTTTAGGGAAATTGTCGCAATGAAGAAAGTAAGAAGTAATCGATCAAAGAGAATCGATTACAACATTTTTTCTTCAAAGTTTAAGGAGGTTACTTCTTGTACAAGCAACAATGAGGATGTTGGAAAAATAATAGTCAAGAAAAGAAAAACAATGGGTGAGGGATCAAGAATTAATCCGTCGAAGAAATTCAAGATTAATCGGGAGAAAGAAGACGTGCAAGAAGAGCAACCCGATCTTCCATTAGCGTTTAAAGAAAGAATTGAAAAACTGAAAGGTATTGATGTGAAGTTGGTGATCCAGAAGAAATTGACCATGACTGATGTGACGCGAAACCACGGTCGATTATCGGTTCCAATAGGTCAAATTAAGATTGAAGAGAGTAGTCTTTTGACACAAGAGGAGGGAATGTCTTTGGATTATGTGCCTCAAAAGAAAGGGAGCAAGAAGCTTGATGGTATGTCTGTATCAATGTTGGATACTAATCTTAAACTTTGGGATGAAATGTGCTTCAAGAAGTGGAAAATGGGGAAGTCTCAAGTCTACAATATTACGGGTGGATGGTACAAACTTGTAGGAGAAAACCATTTGAAAGAAGATCAAAAGATTCAACTTTGGTCTTTTAAAAGAGACAGTCATCTCAATTTTGCACTCGTCAAACTTTAG 819 0.3651 MEEKDFTSKLLGFVGNECIVLESLLLINDPLYGALHSKNSIPIPISESNHQAFREIVAMKKVRSNRSKRIDYNIFSSKFKEVTSCTSNNEDVGKIIVKKRKTMGEGSRINPSKKFKINREKEDVQEEQPDLPLAFKERIEKLKGIDVKLVIQKKLTMTDVTRNHGRLSVPIGQIKIEESSLLTQEEGMSLDYVPQKKGSKKLDGMSVSMLDTNLKLWDEMCFKKWKMGKSQVYNITGGWYKLVGENHLKEDQKIQLWSFKRDSHLNFALVKL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04845 272 Pfam B3 domain-containing protein At2g31720-like 139 243 IPR005508 GO:0003677
Trre10g04845 272 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 51 272 IPR005508 GO:0003677
Trre10g04845 272 SUPERFAMILY DNA-binding pseudobarrel domain 150 267 IPR015300 -
Trre10g04845 272 Gene3D - 142 269 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04845 Trre-Chr10 56604427 56605245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04845 135 269 B3 DNA Binding Superfamily AT1G05930 26.761 3.07e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04845 - - tpra:123890888 419.468