Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04829 ATGGTGGTGATGCAAAAGGAACTGACCCAGAGTGACGTGACAACAAACAACGGTCGGTTGTCTATCCCAAAAAATGAATGCATTACCGAGAAATTTCTAAATTCTGAGGAGAAATCGTCCTTGGATTATGTGCGAGGGAAACATGAGAAGCGTCATACTGTGCTTGTATTTGTGTTGGATCCTAGGATTACACTCTACGACGGCATGTGCTTCAAGAAGTGGAAAATGGTGAAATCTGAGACCTATAATATCACAGGTAAATGGAACAAACTTGTAGTAGAAAACCAATTGGAAGAAGGCCAAAAGGTGCAACTCTAG 318 0.4151 MVVMQKELTQSDVTTNNGRLSIPKNECITEKFLNSEEKSSLDYVRGKHEKRHTVLVFVLDPRITLYDGMCFKKWKMVKSETYNITGKWNKLVVENQLEEGQKVQL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04829 105 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 3 105 IPR005508 GO:0003677
Trre10g04829 105 SUPERFAMILY DNA-binding pseudobarrel domain 4 103 IPR015300 -
Trre10g04829 105 Gene3D - 1 105 IPR015300 -
Trre10g04829 105 Coils Coil 102 105 - -
Trre10g04829 105 Pfam B3 domain-containing protein At2g31720-like 3 92 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04829 Trre-Chr10 56502181 56502498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04829 2 105 B3 DNA Binding Superfamily AT1G05930 28.571 6.24e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04829 - - tpra:123920509 134.806